PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023907688.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 315aa MW: 34897.6 Da PI: 7.0281

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023907688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.1	1.9e-19	213	301	4	95
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE..E..EEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse..felvvk 95 v++ps+ +k +l +p +fa+++ ++ s ++l+ ++g sW v++ + +++ l++GW+eFv +n L+egD++vF+l+++++ +l+v+ XP_023907688.1 213 VMKPSYIHKGYLLHIPSSFAQKYLNS---SGSIVLQISDGPSWLVRC--INEGNGAKLSQGWREFVLDNCLEEGDVCVFELISKEDimLKLKVT 301 7899*****************433...336***********..88888899*********************99765511445555 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MFNLTACESC NIPSCSEEPN HVKQCPASLG KVADNASIEI LGAEEPSHGK HHPVLHGKEI 60 EDDDSIEFLG SFPPRPTSMP WRNNVSDEHV DQQKPYKSCI RTALKNLMHS PDGDNIHLAK 120 DADTLKAKVR STREIGIQFN ETELTRTAGE VGSGYWDEAR QSAKRRKQST EPKFNVEVGM 180 PGAKVSIAVA EKRGRAIRAS LRFTPGNPFC RVVMKPSYIH KGYLLHIPSS FAQKYLNSSG 240 SIVLQISDGP SWLVRCINEG NGAKLSQGWR EFVLDNCLEE GDVCVFELIS KEDIMLKLKV 300 TIFRVLEDAG PGNQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	3e-35	B3 family protein