PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023907687.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 316aa    MW: 34999.6 Da    PI: 6.6676
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023907687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.11.9e-19214302495
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE..E..EEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse..felvvk 95 
                     v++ps+ +k  +l +p +fa+++ ++   s  ++l+ ++g sW v++   + +++  l++GW+eFv +n L+egD++vF+l+++++   +l+v+
  XP_023907687.1 214 VMKPSYIHKGYLLHIPSSFAQKYLNS---SGSIVLQISDGPSWLVRC--INEGNGAKLSQGWREFVLDNCLEEGDVCVFELISKEDimLKLKVT 302
                     7899*******************433...336***************..88888899***********************99765511445555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MFNLTACESC NIPSCSEEPN HVKQCPASLG KVADNASIEI LGAEEPSHGK HHPVLHGKEI  60
EDDDSIEFLG SFPPRPTSMP WRNNVSDEHV DQQKPYKSCI RTALKNLMHS PDGDNIHLAK  120
DADTLKAKVR STREIGIQFN ETELTRTAGE VGSGYWDEAR QSAKRRKQST EPTEFNVEVG  180
MPGAKVSIAV AEKRGRAIRA SLRFTPGNPF CRVVMKPSYI HKGYLLHIPS SFAQKYLNSS  240
GSIVLQISDG PSWLVRCINE GNGAKLSQGW REFVLDNCLE EGDVCVFELI SKEDIMLKLK  300
VTIFRVLEDA GPGNQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-35B3 family protein