PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023907574.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 266aa    MW: 30559.5 Da    PI: 5.3832
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023907574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.61.4e-50101381129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF P+deelv++yL kk++++++    ++ e+d++++ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd++vl+ 
  XP_023907574.1  10 LPPGFRFYPSDEELVCHYLYKKITNEEVLK-GTLMEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGLRTNRATTSGYWKATGKDRTVLDP 103
                     79************************9655.78***************88888999**************************************9 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      ++e vg++ktLvfy++rap+g kt W+mhe+rle
  XP_023907574.1 104 mSREIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 138
                     78888***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KITNEEVLKG TLMEIDLHTC EPWQLPEVAK  60
LNATEWYFFS FRDRKYATGL RTNRATTSGY WKATGKDRTV LDPMSREIVG MRKTLVFYRN  120
RAPNGIKTGW IMHEFRLETP HMPPKEDWVL CRVFHKSKGM APNLEDSNQL MFETTSCGPT  180
SQTMPCGYNQ MTSFASTPSH HNQSNSLLNL LQFSQGTDTN NEITSKGDDD YGFLWDMNME  240
EESLGNGAPS NLEEMRFEID NGMVFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-92NAC family protein