PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023907365.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 305aa    MW: 34025.8 Da    PI: 4.7391
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023907365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM621.8e-19121483128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkya......tgkrknr.atksgyWk 84 
                     +Gf+F+P+d+el++++L +kv+gk+l++ +  i+++d+y   +P ++      ++  ++++++fF++ + k +      +g+r +r + + g+W+
  XP_023907365.1  12 VGFKFDPSDQELLSYFLYNKVTGKSLDFYRGfISDFDLYGPnQPDQIWDlfggSFLRQDEDLFFFTTLSFKGKgkakgsRGSRISRtISSGGTWS 106
                     7************************9997766*******86479777432344555688999***9866554433323344555563355899** PP

             NAM  85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + g+ k ++++ ++  +g+k+ + + +  ++++++  W+m e++l
  XP_023907365.1 107 NEGS-KVIYDAhSSLPIGIKRWFHYEN--SQSPQNGCWIMYEFTL 148
                     ***9.56666536667******99985..555559********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGFSPSPRSK IVGFKFDPSD QELLSYFLYN KVTGKSLDFY RGFISDFDLY GPNQPDQIWD  60
LFGGSFLRQD EDLFFFTTLS FKGKGKAKGS RGSRISRTIS SGGTWSNEGS KVIYDAHSSL  120
PIGIKRWFHY ENSQSPQNGC WIMYEFTLDV EGSSLRLPSS DQAVVASSVL CRLRRNDQAK  180
TTSRKRKVQP QPLPQQDCPR KKQRAAEHAT TTDASDDTLL PLIPISNQHS VVHIDAIASP  240
AAATASEQAL PPMVTISDPV SESEFGHGIF NTDFDDEDFC FDDLDQFLNE FLGDLTDCDD  300
STPLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.17e-09NAC family protein