PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906770.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 498aa MW: 54189.2 Da PI: 6.6512

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00043	123	148	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + C +C ksF +s++++Hi+ H XP_023906770.1 123 FICAapHCLKSFLKRSEFESHINEsH 148 678888****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MLQIRLSKAP AAEGVGGTKP LPVDTVTVAC PDHLVLAELP VAKGIGAATS ASLVKTVGRR 60 SRRPLGERVH FCVRCDFPVA IYGRLSPCEH AFCLDCARSD SICYLCDERI QKIQTIKMME 120 GIFICAAPHC LKSFLKRSEF ESHINESHAD LLQPNAEKED GNESESQSVK QSGASESTAR 180 APPRPVFSPG SNSQIHDRED KTRRQQPREP PPSRPNVQPK QPQSFGQVQN HPSELQPDNN 240 RPQGFDRLGP QNRFHQQGFD TQGGPQQESG QFPDKQQGIL SENQFPEYPP MHSIQTPNFA 300 VPVNTNPMLN PPPPFGYPPF QTEGGQPFYG APYEVTRQDS ASEVGAEQGS LLGFPPVQVG 360 GVNFSGTYAQ PWNGGYVGAP FEHPHGGHGM LDGFDNASDS HGKAAFHQGD YGRNSGGLLL 420 NPPPLANKGV EQAQSGNAMD PRDGKGILAP QPMTLPPPPP PPPHQSQLKR KFYPESSRDG 480 QGYGWQHENR DSFGSGQD

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MLQIRLSKAP AAEGVGGTKP LPVDTVTVAC PDHLVLAELP VAKGIGAATS ASLVKTVGRR  60
SRRPLGERVH FCVRCDFPVA IYGRLSPCEH AFCLDCARSD SICYLCDERI QKIQTIKMME  120
GIFICAAPHC LKSFLKRSEF ESHINESHAD LLQPNAEKED GNESESQSVK QSGASESTAR  180
APPRPVFSPG SNSQIHDRED KTRRQQPREP PPSRPNVQPK QPQSFGQVQN HPSELQPDNN  240
RPQGFDRLGP QNRFHQQGFD TQGGPQQESG QFPDKQQGIL SENQFPEYPP MHSIQTPNFA  300
VPVNTNPMLN PPPPFGYPPF QTEGGQPFYG APYEVTRQDS ASEVGAEQGS LLGFPPVQVG  360
GVNFSGTYAQ PWNGGYVGAP FEHPHGGHGM LDGFDNASDS HGKAAFHQGD YGRNSGGLLL  420
NPPPLANKGV EQAQSGNAMD PRDGKGILAP QPMTLPPPPP PPPHQSQLKR KFYPESSRDG  480
QGYGWQHENR DSFGSGQD