PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906757.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 381aa MW: 43303.3 Da PI: 6.4078

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	185.6	1.1e-57	16	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL++kv ++++++ ++i e+d++k+ePwdLpkk+k +ekewyfF++rd+ky+tg r+nrat+sgyWkatgkdke+++ XP_023906757.1 16 LPPGFRFHPTDEEIITYYLTEKVVNSNFSA-SAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYKG 109 79************************99.88***********99999*************************************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 kg lvg+kktLvfykgrapkgekt+Wvmheyrl XP_023906757.1 110 KGCLVGMKKTLVFYKGRAPKGEKTNWVMHEYRL 142 *****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEEAIVVNKG EEIIDLPPGF RFHPTDEEII TYYLTEKVVN SNFSASAIGE ADLNKCEPWD 60 LPKKAKMGEK EWYFFCQRDR KYPTGMRTNR ATESGYWKAT GKDKEIYKGK GCLVGMKKTL 120 VFYKGRAPKG EKTNWVMHEY RLDGKFSYYN LPKTAKDEWV VCRIFHKNNS GIKKSSTPDG 180 LLRMNSFGDD LLDISSLPPL MDPSFSDTNK PGYVDGNNFP FKGSSSYFSN DHQQQQQQDQ 240 KMFQMPTNTS YHNPILNQGL YPQTQVPNQY PFNFPANPIQ SGYLHQGRST GTSSSIPSSN 300 YGFGVNEQGI LERQCKVEQF SSNQSMSMVS HSQDTGLSTA DMNAEISSLV SKQQDNRSYD 360 DLIEGPSLGP IADFDRFNWD Y

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEEAIVVNKG EEIIDLPPGF RFHPTDEEII TYYLTEKVVN SNFSASAIGE ADLNKCEPWD  60
LPKKAKMGEK EWYFFCQRDR KYPTGMRTNR ATESGYWKAT GKDKEIYKGK GCLVGMKKTL  120
VFYKGRAPKG EKTNWVMHEY RLDGKFSYYN LPKTAKDEWV VCRIFHKNNS GIKKSSTPDG  180
LLRMNSFGDD LLDISSLPPL MDPSFSDTNK PGYVDGNNFP FKGSSSYFSN DHQQQQQQDQ  240
KMFQMPTNTS YHNPILNQGL YPQTQVPNQY PFNFPANPIQ SGYLHQGRST GTSSSIPSSN  300
YGFGVNEQGI LERQCKVEQF SSNQSMSMVS HSQDTGLSTA DMNAEISSLV SKQQDNRSYD  360
DLIEGPSLGP IADFDRFNWD Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-111	NAC family protein