PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906754.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 355aa MW: 39860.1 Da PI: 8.591

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.5	2e-30	182	236	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtp+LH++Fv++ve+LGG+ekAtPk+il+lm+ + Lt+ hvkSHLQkYR+ XP_023906754.1 182 KKRIRWTPDLHNQFVKCVERLGGPEKATPKAILKLMETNLLTIFHVKSHLQKYRT 236 78****************************************************8 PP
2	Myb_DNA-binding	47.7	3.6e-15	186	235	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++ ++v++v++lGg+ t+k+I + m + +t ++ks++qky+ XP_023906754.1 186 RWTPDLHNQFVKCVERLGGPekaTPKAILKLMEtNLLTIFHVKSHLQKYR 235 9*******************************99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MGVQTPAMRE VTQQLNFEPP KLSNSTTTNP FGSISSAFQI TGYMGFQQQF GNSPLASSKD 60 QQFGNSPLAI SQFPSFDSDV LSCQSSGKNF SLTDSAEQAA GSNLDLRDSL QSLVKSHLYS 120 SSDKSNVPRN NTCRSNRFPH DQNMLLGVDS AFVRRPFSLS SYANQGLKVC HSASSRPAPT 180 LKKRIRWTPD LHNQFVKCVE RLGGPEKATP KAILKLMETN LLTIFHVKSH LQKYRTTLSG 240 AESVDEMPKR RAGADCNPQL HVKISMQIQE TLQLQLEVEK RLHEQLEVQQ NLQIMIQEQL 300 RQLRMMSHVQ EDKTMASLFL QILQENGHTD DECYKLHEFL KNAALVTSSI SNQKD

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MGVQTPAMRE VTQQLNFEPP KLSNSTTTNP FGSISSAFQI TGYMGFQQQF GNSPLASSKD  60
QQFGNSPLAI SQFPSFDSDV LSCQSSGKNF SLTDSAEQAA GSNLDLRDSL QSLVKSHLYS  120
SSDKSNVPRN NTCRSNRFPH DQNMLLGVDS AFVRRPFSLS SYANQGLKVC HSASSRPAPT  180
LKKRIRWTPD LHNQFVKCVE RLGGPEKATP KAILKLMETN LLTIFHVKSH LQKYRTTLSG  240
AESVDEMPKR RAGADCNPQL HVKISMQIQE TLQLQLEVEK RLHEQLEVQQ NLQIMIQEQL  300
RQLRMMSHVQ EDKTMASLFL QILQENGHTD DECYKLHEFL KNAALVTSSI SNQKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	5e-44	G2-like family protein