PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906745.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 386aa MW: 43257.5 Da PI: 7.5439

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.6	4.9e-32	212	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fve+v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+ XP_023906745.1 212 KTRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDTDGLTIFHVKSHLQKYRI 266 68****************************************************7 PP
2	Myb_DNA-binding	48.8	1.6e-15	216	265	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++v++v++lGg t+k+I + m g+t ++ks++qky+ XP_023906745.1 216 RWTQDLHEKFVECVNRLGGAekaTPKAILKLMDtDGLTIFHVKSHLQKYR 265 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MGTCFQPLNM EGGSQAQYIG PAKSSTTIMS RFESPASAFY ATERCMGFPQ YEGEVGNPFM 60 SSQFSRSYDS QLPAYQSVGE DYSIDTAHPA EPNFNLRNTL QAIVKSQFSS NQYCGPSENS 120 YKMSCSNSPA CKLLPHEQNK LLGDDTNYGR RHLLIPFKGN QEIQDHMANC NSYNSPFGRL 180 NLSSQQEKHS SRESVSVTSG NSASTGAVLS SKTRIRWTQD LHEKFVECVN RLGGAEKATP 240 KAILKLMDTD GLTIFHVKSH LQKYRIAIYM PDSTEGKTEK RNILNDLPLF DAKTGLQIRE 300 ALQLQLEVQR RLHEQLEIQR NLQLKIEEQG KQLKMMFDQQ QKTNCSILKN HNLDTTFSAD 360 PSISLNDIQA SIAESSGNSH FPSKIN

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MGTCFQPLNM EGGSQAQYIG PAKSSTTIMS RFESPASAFY ATERCMGFPQ YEGEVGNPFM  60
SSQFSRSYDS QLPAYQSVGE DYSIDTAHPA EPNFNLRNTL QAIVKSQFSS NQYCGPSENS  120
YKMSCSNSPA CKLLPHEQNK LLGDDTNYGR RHLLIPFKGN QEIQDHMANC NSYNSPFGRL  180
NLSSQQEKHS SRESVSVTSG NSASTGAVLS SKTRIRWTQD LHEKFVECVN RLGGAEKATP  240
KAILKLMDTD GLTIFHVKSH LQKYRIAIYM PDSTEGKTEK RNILNDLPLF DAKTGLQIRE  300
ALQLQLEVQR RLHEQLEIQR NLQLKIEEQG KQLKMMFDQQ QKTNCSILKN HNLDTTFSAD  360
PSISLNDIQA SIAESSGNSH FPSKIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	2e-75	G2-like family protein