PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906742.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 438aa MW: 49254.1 Da PI: 7.3266

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.9e-32	264	318	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fve+v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+ XP_023906742.1 264 KTRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDTDGLTIFHVKSHLQKYRI 318 68****************************************************7 PP
2	Myb_DNA-binding	48.5	1.9e-15	268	317	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++v++v++lGg t+k+I + m g+t ++ks++qky+ XP_023906742.1 268 RWTQDLHEKFVECVNRLGGAekaTPKAILKLMDtDGLTIFHVKSHLQKYR 317 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MQTPDATRKL NMNTHKIDCR EQVNESNGVI NDCSSEFGNR SSEFLGYKQP WHMGTCFQPL 60 NMEGGSQAQY IGPAKSSTTI MSRFESPASA FYATERCMGF PQYEGEVGNP FMSSQFSRSY 120 DSQLPAYQSV GEDYSIDTAH PAEPNFNLRN TLQAIVKSQF SSNQYCGPSE NSYKMSCSNS 180 PACKLLPHEQ NKLLGDDTNY GRRHLLIPFK GNQEIQDHMA NCNSYNSPFG RLNLSSQQEK 240 HSSRESVSVT SGNSASTGAV LSSKTRIRWT QDLHEKFVEC VNRLGGAEKA TPKAILKLMD 300 TDGLTIFHVK SHLQKYRIAI YMPDSTEGKT EKRNILNDLP LFDAKTGLQI REALQLQLEV 360 QRRLHEQLEI QRNLQLKIEE QGKQLKMMFD QQQKTNCSIL KNHNLDTTFS ADPSISLNDI 420 QASIAESSGN SHFPSKIN

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MQTPDATRKL NMNTHKIDCR EQVNESNGVI NDCSSEFGNR SSEFLGYKQP WHMGTCFQPL  60
NMEGGSQAQY IGPAKSSTTI MSRFESPASA FYATERCMGF PQYEGEVGNP FMSSQFSRSY  120
DSQLPAYQSV GEDYSIDTAH PAEPNFNLRN TLQAIVKSQF SSNQYCGPSE NSYKMSCSNS  180
PACKLLPHEQ NKLLGDDTNY GRRHLLIPFK GNQEIQDHMA NCNSYNSPFG RLNLSSQQEK  240
HSSRESVSVT SGNSASTGAV LSSKTRIRWT QDLHEKFVEC VNRLGGAEKA TPKAILKLMD  300
TDGLTIFHVK SHLQKYRIAI YMPDSTEGKT EKRNILNDLP LFDAKTGLQI REALQLQLEV  360
QRRLHEQLEI QRNLQLKIEE QGKQLKMMFD QQQKTNCSIL KNHNLDTTFS ADPSISLNDI  420
QASIAESSGN SHFPSKIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	1e-74	G2-like family protein