PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906730.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 669aa MW: 74524.5 Da PI: 9.0068

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.4	1.1e-10	22	75	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqk 46 ++ W t+E++ll++av+++G+++W+++++++ +t+ +ck ++++ XP_023906730.1 22 KQTWGTWEELLLACAVHRYGTESWDSVSAELRkrstttlhHVLTPHSCKQKYLD 75 789*****************************8888777755788888888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MKRGEVKRRE KVFMEKQSFP EKQTWGTWEE LLLACAVHRY GTESWDSVSA ELRKRSTTTL 60 HHVLTPHSCK QKYLDLQRRF NQNDHLDELR KLRVAELKRE VQRYDLSIVS LQLKVKELTE 120 EHVQEDEKAT EKSDLKNIVE DENEATDAEP VNTSPEDDAG EVAAPCGDSD KESNSTDPKS 180 EAPETGGEET EKEAEQGEPV GGGSGPVEEA ARPVVEDSYN GSSDTVMKGS AAEEKGKLGG 240 ESGELWESVS ESKGGGREET TKESNSDVQS SACNEDQSPA TTKPSSVQSH PLIYFLDTLR 300 SHCSDSFFEC RLQTQETSNY MSLIRQHVDL KTIQTRLEEG CYSGNDSKFF RDLLLLFNNA 360 IFFFDKKSSE FMSAIKLRQI VLNEMSSKIN LKPDPERKEE EKPVPTLPQC IKSDPEPSDS 420 LLLKTKISIP LTACRKRSSI TAKALASSSS GPDKKKEQMA TLKDEKPVVE LNQHDKSSEK 480 TEENRVTKKR TRERSKTNSR SSSKNRNRGR TNPNTNKNSD ANSNSGFSTK GVSQNENSES 540 RHEKEKKNTT TTFKKKSAAN FLNRMKRNSS SPNGSSLLET LKSCDNSKGG AEQKKNGNGK 600 GDLRKEQTSS RKGSRGKQEK IPESPGKRNV GRPPKRAAAP SPALPAKRGR DAGETEAGSS 660 RHSKKRSRK

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MKRGEVKRRE KVFMEKQSFP EKQTWGTWEE LLLACAVHRY GTESWDSVSA ELRKRSTTTL  60
HHVLTPHSCK QKYLDLQRRF NQNDHLDELR KLRVAELKRE VQRYDLSIVS LQLKVKELTE  120
EHVQEDEKAT EKSDLKNIVE DENEATDAEP VNTSPEDDAG EVAAPCGDSD KESNSTDPKS  180
EAPETGGEET EKEAEQGEPV GGGSGPVEEA ARPVVEDSYN GSSDTVMKGS AAEEKGKLGG  240
ESGELWESVS ESKGGGREET TKESNSDVQS SACNEDQSPA TTKPSSVQSH PLIYFLDTLR  300
SHCSDSFFEC RLQTQETSNY MSLIRQHVDL KTIQTRLEEG CYSGNDSKFF RDLLLLFNNA  360
IFFFDKKSSE FMSAIKLRQI VLNEMSSKIN LKPDPERKEE EKPVPTLPQC IKSDPEPSDS  420
LLLKTKISIP LTACRKRSSI TAKALASSSS GPDKKKEQMA TLKDEKPVVE LNQHDKSSEK  480
TEENRVTKKR TRERSKTNSR SSSKNRNRGR TNPNTNKNSD ANSNSGFSTK GVSQNENSES  540
RHEKEKKNTT TTFKKKSAAN FLNRMKRNSS SPNGSSLLET LKSCDNSKGG AEQKKNGNGK  600
GDLRKEQTSS RKGSRGKQEK IPESPGKRNV GRPPKRAAAP SPALPAKRGR DAGETEAGSS  660
RHSKKRSRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	1e-64	MYB_related family protein