PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023906612.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HRT-like | ||||||||
Protein Properties | Length: 620aa MW: 68518.3 Da PI: 9.4993 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 57 | 3.3e-18 | 275 | 304 | 2 | 31 |
HRT-like 2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 CGv l+dGsvC r+P + RKRC+eHKGmRi XP_023906612.1 275 CGVSLGDGSVCWRPPLERRKRCAEHKGMRI 304 *****************************7 PP | |||||||
2 | HRT-like | 58.5 | 1.1e-18 | 364 | 394 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l++Gs+C+rqP+kgRKRC HKGmRi XP_023906612.1 364 ICGVPLNNGSPCSRQPAKGRKRCDDHKGMRI 394 8*****************************7 PP | |||||||
3 | HRT-like | 40.4 | 5e-13 | 457 | 483 | 1 | 27 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHK 27 iC v l+ G C+rqP++gR RCeeHK XP_023906612.1 457 ICEVDLGSGAYCTRQPARGRVRCEEHK 483 8************************** PP | |||||||
4 | HRT-like | 33.3 | 8.3e-11 | 522 | 551 | 1 | 30 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 +CG++ +dGs C+r+ v+g+KRC++H G R XP_023906612.1 522 TCGATCRDGSLCRRKLVEGNKRCWQHGGIR 551 7*************************9977 PP | |||||||
5 | HRT-like | 52.6 | 7.7e-17 | 584 | 613 | 1 | 30 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 +CG++ dGs C+rqPv+g+KRC++HKGmR XP_023906612.1 584 TCGATCHDGSLCRRQPVEGNKRCWQHKGMR 613 7****************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 620 aa Download sequence |
MVATASSDSL TTRLKREDCN RTKHDSVFSN WKVLVGPSDW EDYSLGKEGA ARYRVHNLPK 60 SSGSGIYELG IAVSQTGLGR EVGKLDPDRL VVVYLGQADN VRTRLQQYGR TGAHLGNSYA 120 NGCANDSKNV SLQKRLGLFD ETLSRGYPIV FRWAPMESKR DAEKTEAQLL NRFDYAWNTS 180 FNGARRPDDI VQKLNKIASG TTRYSNIVRK LLPFSQKQVG IRIKASKLPS PENKLNTYAD 240 EESYNFLPRV FKFGRSQPRL VLDRIGVIED NTSFCGVSLG DGSVCWRPPL ERRKRCAEHK 300 GMRIHMSILK VVTEGKPTSI VGSDFSTVAD RKSGSDSAQN FSDGTTELQP VPVKCPVSES 360 VTPICGVPLN NGSPCSRQPA KGRKRCDDHK GMRICRFISE SVTEGKSQYD HDVDLDSSCH 420 DALSYNQNSS AMCKPGIVLQ PRVSSEKLVV SKGYGTICEV DLGSGAYCTR QPARGRVRCE 480 EHKWLKINGL VLKLEAEDKS HVSGLGSKLS TSNDYKYGNS TTCGATCRDG SLCRRKLVEG 540 NKRCWQHGGI RAGGSFSGFD SGINSLTCSK LSSYNDYKYG NSTTCGATCH DGSLCRRQPV 600 EGNKRCWQHK GMRAGRSFYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56780.1 | 1e-103 | HRT-like family protein |