PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023906593.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 293aa    MW: 31812.5 Da    PI: 9.555
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023906593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14.1e-13102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qky
   XP_023906593.1 102 PWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTY RETFAGGLRL FGVQLDLSSS FALKKSFSVD CLYQPSSSSP  60
TSPSSSLSSS RISIDENSDK TTIGYLSDGL ICRPQERKKG VPWTEEEHRT FLIGLEKLGK  120
GDWRGISRNY VTTRTPTQVA SHAQKYFLRQ ASLNKKKRRS SLFDMVGSSS NMLGHPASST  180
NSKPSDAVPA EYCKTSSSQH DTTLPLLGHS SSQQDAKSDN QETEDPQLPS SSKANVPVWL  240
YGLVDSQLKT SHAAKPSSSN ASPNLELTLA APRPLEQNKS SPAPLLFGPI TVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155159KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.17e-54MYB_related family protein