PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023906382.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 300aa MW: 34276.5 Da PI: 8.877 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.7 | 1.3e-08 | 28 | 73 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT eE +++ +a +++ ++ +W +Ia++++ g+t ++ ++ XP_023906382.1 28 NWTLEENKRFENALALYDKDtpdRWLRIAAMIP-GKTVGDVMKQYRE 73 8********************************.****999998875 PP | |||||||
2 | Myb_DNA-binding | 46 | 1.2e-14 | 135 | 179 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + k++G+g+W+ Iar ++Rt+ q+ s+ qky XP_023906382.1 135 PWTEEEHRQFLLGLKKYGKGDWRNIARNYVTTRTPTQVASHAQKY 179 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MNPEIEIQSP ASYLQNSNWL YQESKGTNWT LEENKRFENA LALYDKDTPD RWLRIAAMIP 60 GKTVGDVMKQ YRELEEDVSD IEAGLIPIPG YGSNSFTLEW VNNQGFGDLK QFYSVGGKRG 120 ASTRPSDQER KKGIPWTEEE HRQFLLGLKK YGKGDWRNIA RNYVTTRTPT QVASHAQKYF 180 IRQLSGGKDK RRSSIHDITI VNVPETKSPS SDGKRSPSPD HCAMVMQPQQ HLEMGVISRQ 240 QPYDWKTPYE ATTMAFNPAN VNMFMKPFCG ISSYGPNLQE QNLFRSTLHG SQFGPYNTMF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-122 | MYB family protein |