PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023906346.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 159aa MW: 17740.4 Da PI: 8.8698 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 30 | 81 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+G+r+++ +g+++AeIrdps ng +r +lg+f+taeeAa+a+++a+ ++g+ XP_023906346.1 30 RYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFDTAEEAARAYDRAAFGFRGH 81 69*******.**********98887..**********************988886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MSHFIFETQN TNMNGKRVGN EEKGNSNEVR YRGIRRRPWG KFAAEIRDPS RNGARLWLGT 60 FDTAEEAARA YDRAAFGFRG HLAILNFPNE YQYQNPSSSS SNSRTFPSSS SSSARGKSFG 120 KVGSSTGQEG EVIEFEYLDN KLLDELLETH GDIGKGFGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 1e-33 | ERF family protein |