PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023905760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | B3 | ||||||||
Protein Properties | Length: 228aa MW: 25385.2 Da PI: 10.5984 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.7 | 1e-13 | 128 | 218 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f k + +s+v +l lp ++++e +++++ + tl de+g + k+ +k++ l++GWk+F+ a++L gD +vF+l+gr++f +v XP_023905760.1 128 FTKSMQSSHVAGGFWLGLPSTYFSERNLPSH-DAIKTLIDEDGDGYPTKYLAKKSG----LSGGWKGFAVAHHLAYGDALVFQLMGRTTF--KVY 215 889999*****************99987754.4577999***********544444....9*************************9888..777 PP EE- CS B3 96 vfr 98 ++r XP_023905760.1 216 IVR 218 766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MVVAKRSYED SRRKRVEENK KRMEALNLPL LSQALKTSSS PKPSPKKQAK PRVAQKLVVE 60 VRRSTRFVNK PAPIYKEVDV DRVAIPRRVF GRKRNLSNLI LASSESEAEA EEQAGKLVWG 120 LPPGCPIFTK SMQSSHVAGG FWLGLPSTYF SERNLPSHDA IKTLIDEDGD GYPTKYLAKK 180 SGLSGGWKGF AVAHHLAYGD ALVFQLMGRT TFKVYIVRVN GSEEGNKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 12 | 50 | RRKRVEENKKRMEALNLPLLSQALKTSSSPKPSPKKQAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 1e-61 | B3 family protein |