PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023905631.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 236aa MW: 26551.4 Da PI: 4.4514 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.4e-17 | 10 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+el+ +++k+lG++ W++Ia +++ gRt++++k++w++yl XP_023905631.1 10 RGNISQDEEELIMRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSYL 55 7899******************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MNYLRPDIKR GNISQDEEEL IMRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNSYLAKKTQ 60 DQIPSPKSRT DQKKPTIRVH HESDALLEGK GVLVSAQHHV DDDQIHETKV PIFLTPTVET 120 NMVKIKSSIS ESSAGSPSTS KEENMSDFIL DLSSDDFCKM LDSDFAKLSD VDINELHNIA 180 IEGDKDSLLV LSEETENNGR ESGQLNNSNM VSDFQSLFLD SDDGWLGDDL NIAFSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 2e-30 | MYB family protein |