PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905631.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 236aa    MW: 26551.4 Da    PI: 4.4514
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905631.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.4e-171055148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+ +++E+el+ +++k+lG++ W++Ia +++ gRt++++k++w++yl
   XP_023905631.1 10 RGNISQDEEELIMRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSYL 55
                     7899******************.*********.*************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MNYLRPDIKR GNISQDEEEL IMRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNSYLAKKTQ  60
DQIPSPKSRT DQKKPTIRVH HESDALLEGK GVLVSAQHHV DDDQIHETKV PIFLTPTVET  120
NMVKIKSSIS ESSAGSPSTS KEENMSDFIL DLSSDDFCKM LDSDFAKLSD VDINELHNIA  180
IEGDKDSLLV LSEETENNGR ESGQLNNSNM VSDFQSLFLD SDDGWLGDDL NIAFSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.12e-30MYB family protein