PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905266.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C3H
Protein Properties Length: 273aa    MW: 31530.4 Da    PI: 8.5902
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905266.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.79.7e-09113136326
                     S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                     +++C+ f+++G C+ Gd C++ H+
  XP_023905266.1 113 ERECKEFSKYGLCPAGDDCTYLHV 136
                     789********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MAATEPVQQQ QQQVPLTDRI LHPDQQPIPV FSFSNYLQQH LPSVGAPSKS HRPVCQDYKS  60
GRCPRGPNCP DRHTVPHADR HGSQHLICKH YQRGLCKRPD TCEYAHTFNL RDERECKEFS  120
KYGLCPAGDD CTYLHVHPNS PARRPACPHY TRGFCPLGSH CALRHIKHKN ICPFYLAGFC  180
PNGRSHPPEV DKVVTCEFGA HARWIADDDL HPKKPEARKR EDEEREAKEQ ELREDDYYAE  240
AEELRRRQDR GEVPRGRWGG HRGRRPGRGF RRA