PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023905032.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 381aa MW: 42228.5 Da PI: 7.0476

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023905032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.7e-32	223	278	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs+ AtPk+i+e+mkv+gLt+++vkSHLQkYRl+ XP_023905032.1 223 KQRRNWSPELHKRFVNALHQLGGSHAATPKQIREIMKVDGLTNDEVKSHLQKYRLH 278 79****************************************************97 PP
2	Myb_DNA-binding	46.1	1.1e-14	225	276	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W++e+++++v+a +qlGg t+k I + m g+t ++ks++qky+ XP_023905032.1 225 RRNWSPELHKRFVNALHQLGGShaaTPKQIREIMKvDGLTNDEVKSHLQKYR 276 679***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MDYYTEKMQH GGLGFREYVE ALEEERRKIQ VFQRELPLCL ELVNQAIDAC RQQMSGTTTE 60 NNLHGQSESS EQTTSNEVVP AFEEFIPMKR SSDLSDDDDE EHSHEDKREK TNNNNDNNND 120 KKKSDWLRSV QLWHPSSDPP LKEDVPRKTT VMEVKRNGGA FQPFHREKSV VKSNVSVVGK 180 LPAQAPVAAP AVAVATTSSS AETASGGGGS ERRDEKDGQS QRKQRRNWSP ELHKRFVNAL 240 HQLGGSHAAT PKQIREIMKV DGLTNDEVKS HLQKYRLHTR RPSPTTIHNN GNLQAPQFVV 300 VGGIWVQPPE YSGAVTATTT SGEVYAPMAA VQPASSSQIQ RLQKDPSSLS DERFSHSGNR 360 GCSNSPATSS STHTTTTSPV F

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MDYYTEKMQH GGLGFREYVE ALEEERRKIQ VFQRELPLCL ELVNQAIDAC RQQMSGTTTE  60
NNLHGQSESS EQTTSNEVVP AFEEFIPMKR SSDLSDDDDE EHSHEDKREK TNNNNDNNND  120
KKKSDWLRSV QLWHPSSDPP LKEDVPRKTT VMEVKRNGGA FQPFHREKSV VKSNVSVVGK  180
LPAQAPVAAP AVAVATTSSS AETASGGGGS ERRDEKDGQS QRKQRRNWSP ELHKRFVNAL  240
HQLGGSHAAT PKQIREIMKV DGLTNDEVKS HLQKYRLHTR RPSPTTIHNN GNLQAPQFVV  300
VGGIWVQPPE YSGAVTATTT SGEVYAPMAA VQPASSSQIQ RLQKDPSSLS DERFSHSGNR  360
GCSNSPATSS STHTTTTSPV F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	2e-82	G2-like family protein