PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904945.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 274aa    MW: 30614.8 Da    PI: 8.2135
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904945.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.21.1e-16341101799
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     ++pkkf++e+gg    s +  l+ ++g +W+vkl  +k++g++ +++GW eF++++ L  g  +vF+++g+sef   v +f++
  XP_023904945.1  34 WIPKKFISEYGGH--LSDMAFLTIPNGTKWKVKL--TKSDGEVCFGNGWCEFASSHALALGHLLVFRYEGNSEF--SVLIFDA 110
                     79********988..776788888**********..**********************************9999..9999875 PP
2B339.41.1e-121962712298
                     H.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  22 faeehggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     f++++   k +++t++le    r W vkl iy++k  ++v ++GW  F+++n L+ gD++vF+++ r+e   +v++fr
  XP_023904945.1 196 FTKDY-TTKGSTFTVKLEV-VDRLWPVKLyIYEGKYTSCVVSAGWVAFARDNTLRLGDVCVFEVIMRDEVVVKVHIFR 271
                     44444.2345666777666.5699****9677999999*************************998877778888886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVLILTAQLK FHLIDCMCLF TKLAFMLMFV FLQWIPKKFI SEYGGHLSDM AFLTIPNGTK  60
WKVKLTKSDG EVCFGNGWCE FASSHALALG HLLVFRYEGN SEFSVLIFDA IATEIEYPAA  120
ELRDCTGEKP PVPLPHKRAK TNPSSFKGSR LEKLKMPFGV SLTRGESSGS AHGVAGVAET  180
LSLPHGIINY LPSEGFTKDY TTKGSTFTVK LEVVDRLWPV KLYIYEGKYT SCVVSAGWVA  240
FARDNTLRLG DVCVFEVIMR DEVVVKVHIF RCPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-17B3 family protein