PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904593.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 74aa    MW: 8623.27 Da    PI: 4.1499
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.45.2e-112767345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      ++++E+ l+++ +++ G + W++Ia +++ gRt++++  +w 
   XP_023904593.1 27 EFSEDEETLIIRMFNLVGER-WALIAGRIP-GRTAEEIEKYWT 67
                     69******************.*********.***********6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MADSEHSSSN ETSTYTQEET SEETKHEFSE DEETLIIRMF NLVGERWALI AGRIPGRTAE  60
EIEKYWTTRY STSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.12e-17MYB_related family protein