PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904394.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 361aa MW: 40736.9 Da PI: 8.4205

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.7	9.3e-53	8	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+ +yL+k+v++++l++ ++i+evdiyk++Pw+Lp+k++ ++kewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ XP_023904394.1 8 LPPGFRFHPTDEELILHYLRKRVASTPLPV-SIIAEVDIYKFDPWELPEKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTILTS 101 79**************************.89***********988899***********************************98 PP NAM 96 ...........kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++g+kk Lvfykgr pkg kt+W+mheyrl XP_023904394.1 102 taaarggggggNLQNIGVKKALVFYKGRPPKGIKTNWIMHEYRL 145 777766666555555*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MKNPQTPLPP GFRFHPTDEE LILHYLRKRV ASTPLPVSII AEVDIYKFDP WELPEKAAFG 60 DKEWYFFSPR DRKYPNGARP NRAAASGYWK ATGTDKTILT STAAARGGGG GGNLQNIGVK 120 KALVFYKGRP PKGIKTNWIM HEYRLAELPN HTSNKPIKLK DTSMRLDDWV LCRIYRKSNA 180 LPPITAAASD QDQEEDEQEH VIQDTILPSL KIPVGPNSTL MPQKSSSFSN LLDAMDYSLL 240 SSLLSDNHCW NTTGFESTFN NGSLDQPFFN NSIASGSSSE NYMFQKLPQL NSLAPNMENQ 300 LKRQHSNLDH EDMLYPSKKF MSSCSFSNST NQSDIPQYNI LNQSLFNQQL LLSSPHLQFQ 360 K

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MKNPQTPLPP GFRFHPTDEE LILHYLRKRV ASTPLPVSII AEVDIYKFDP WELPEKAAFG  60
DKEWYFFSPR DRKYPNGARP NRAAASGYWK ATGTDKTILT STAAARGGGG GGNLQNIGVK  120
KALVFYKGRP PKGIKTNWIM HEYRLAELPN HTSNKPIKLK DTSMRLDDWV LCRIYRKSNA  180
LPPITAAASD QDQEEDEQEH VIQDTILPSL KIPVGPNSTL MPQKSSSFSN LLDAMDYSLL  240
SSLLSDNHCW NTTGFESTFN NGSLDQPFFN NSIASGSSSE NYMFQKLPQL NSLAPNMENQ  300
LKRQHSNLDH EDMLYPSKKF MSSCSFSNST NQSDIPQYNI LNQSLFNQQL LLSSPHLQFQ  360
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	7e-92	NAC family protein