PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904360.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 689aa MW: 76390.6 Da PI: 8.4745

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	590	639	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_023904360.1 590 RRPFSVTEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 639 678999******************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MVLEKRLDYG FIGYQVPPMP RAARSARRGT FRKRTEDNQM CAFDLLATVA GNMLLEKESS 60 PTSSNTSNEK NRCEFVQKAL ENEDKPVKIE PSFQESSDKR VLVSELVHQA GDQNFSNRES 120 PLPQNDVHSG LASVVTTDCS EIFVAEKLVN GENNNEMGSF TSNVDLGFSG YRDSSNCKLD 180 CENKLIIKDD LHKTGKVPIG IGADMCSLED PVVCDGRPPA LVSSDSSVKV PLCGDHIPCS 240 SFPAIRDDVK IVSRDDDENS SGCTHPSTIA KSIRPVSHIA DRRIRKILAS KYWKVSSKLK 300 EETLSNVDGD LKLICRNRKG YYKRQRSQMN IPFKKRKIFQ RSLVSNSDRW ISYEGNSHST 360 EKGINGDDLG SCLKMHGASG TSSSVVGQHT SVQSRDSYVK LRIKSFRVPE LLIEMSETAT 420 VASLKRAVME AVTSILGGGL RVGVLLQGKK VRDDNKTLQQ TGIAHDYPLD ALGFTLEPNP 480 AQKPPPLCPR DSSCMLPCDT PQPLTRYPLD STVVHQGDSH ASPEPHAASL GTFIESDHDS 540 APSPTDTSVD KSTTDSKALV AVSAMDVDTL AVVPVHRKLK RSEMAQRRIR RPFSVTEVEA 600 LVQAVEKLGT GRWRDVKLRA FDNAKHRTYV DLKDKWKTLV HTARISPQQR RGEPVPQELL 660 DRVLCAHAYW SQQQAKQQLK QQPETCLLL

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MVLEKRLDYG FIGYQVPPMP RAARSARRGT FRKRTEDNQM CAFDLLATVA GNMLLEKESS  60
PTSSNTSNEK NRCEFVQKAL ENEDKPVKIE PSFQESSDKR VLVSELVHQA GDQNFSNRES  120
PLPQNDVHSG LASVVTTDCS EIFVAEKLVN GENNNEMGSF TSNVDLGFSG YRDSSNCKLD  180
CENKLIIKDD LHKTGKVPIG IGADMCSLED PVVCDGRPPA LVSSDSSVKV PLCGDHIPCS  240
SFPAIRDDVK IVSRDDDENS SGCTHPSTIA KSIRPVSHIA DRRIRKILAS KYWKVSSKLK  300
EETLSNVDGD LKLICRNRKG YYKRQRSQMN IPFKKRKIFQ RSLVSNSDRW ISYEGNSHST  360
EKGINGDDLG SCLKMHGASG TSSSVVGQHT SVQSRDSYVK LRIKSFRVPE LLIEMSETAT  420
VASLKRAVME AVTSILGGGL RVGVLLQGKK VRDDNKTLQQ TGIAHDYPLD ALGFTLEPNP  480
AQKPPPLCPR DSSCMLPCDT PQPLTRYPLD STVVHQGDSH ASPEPHAASL GTFIESDHDS  540
APSPTDTSVD KSTTDSKALV AVSAMDVDTL AVVPVHRKLK RSEMAQRRIR RPFSVTEVEA  600
LVQAVEKLGT GRWRDVKLRA FDNAKHRTYV DLKDKWKTLV HTARISPQQR RGEPVPQELL  660
DRVLCAHAYW SQQQAKQQLK QQPETCLLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-137	MYB_related family protein