PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904359.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 690aa MW: 76518.8 Da PI: 8.5572

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	591	640	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_023904359.1 591 RRPFSVTEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 640 678999******************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MVLEKRLDYG FIGYQVPPMP RAARSARKRG TFRKRTEDNQ MCAFDLLATV AGNMLLEKES 60 SPTSSNTSNE KNRCEFVQKA LENEDKPVKI EPSFQESSDK RVLVSELVHQ AGDQNFSNRE 120 SPLPQNDVHS GLASVVTTDC SEIFVAEKLV NGENNNEMGS FTSNVDLGFS GYRDSSNCKL 180 DCENKLIIKD DLHKTGKVPI GIGADMCSLE DPVVCDGRPP ALVSSDSSVK VPLCGDHIPC 240 SSFPAIRDDV KIVSRDDDEN SSGCTHPSTI AKSIRPVSHI ADRRIRKILA SKYWKVSSKL 300 KEETLSNVDG DLKLICRNRK GYYKRQRSQM NIPFKKRKIF QRSLVSNSDR WISYEGNSHS 360 TEKGINGDDL GSCLKMHGAS GTSSSVVGQH TSVQSRDSYV KLRIKSFRVP ELLIEMSETA 420 TVASLKRAVM EAVTSILGGG LRVGVLLQGK KVRDDNKTLQ QTGIAHDYPL DALGFTLEPN 480 PAQKPPPLCP RDSSCMLPCD TPQPLTRYPL DSTVVHQGDS HASPEPHAAS LGTFIESDHD 540 SAPSPTDTSV DKSTTDSKAL VAVSAMDVDT LAVVPVHRKL KRSEMAQRRI RRPFSVTEVE 600 ALVQAVEKLG TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL VHTARISPQQ RRGEPVPQEL 660 LDRVLCAHAY WSQQQAKQQL KQQPETCLLL

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MVLEKRLDYG FIGYQVPPMP RAARSARKRG TFRKRTEDNQ MCAFDLLATV AGNMLLEKES  60
SPTSSNTSNE KNRCEFVQKA LENEDKPVKI EPSFQESSDK RVLVSELVHQ AGDQNFSNRE  120
SPLPQNDVHS GLASVVTTDC SEIFVAEKLV NGENNNEMGS FTSNVDLGFS GYRDSSNCKL  180
DCENKLIIKD DLHKTGKVPI GIGADMCSLE DPVVCDGRPP ALVSSDSSVK VPLCGDHIPC  240
SSFPAIRDDV KIVSRDDDEN SSGCTHPSTI AKSIRPVSHI ADRRIRKILA SKYWKVSSKL  300
KEETLSNVDG DLKLICRNRK GYYKRQRSQM NIPFKKRKIF QRSLVSNSDR WISYEGNSHS  360
TEKGINGDDL GSCLKMHGAS GTSSSVVGQH TSVQSRDSYV KLRIKSFRVP ELLIEMSETA  420
TVASLKRAVM EAVTSILGGG LRVGVLLQGK KVRDDNKTLQ QTGIAHDYPL DALGFTLEPN  480
PAQKPPPLCP RDSSCMLPCD TPQPLTRYPL DSTVVHQGDS HASPEPHAAS LGTFIESDHD  540
SAPSPTDTSV DKSTTDSKAL VAVSAMDVDT LAVVPVHRKL KRSEMAQRRI RRPFSVTEVE  600
ALVQAVEKLG TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL VHTARISPQQ RRGEPVPQEL  660
LDRVLCAHAY WSQQQAKQQL KQQPETCLLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-144	MYB_related family protein