PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023904346.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 236aa MW: 26652.2 Da PI: 8.9714 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 52.6 | 7.8e-17 | 129 | 184 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HH.HHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsae.ereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ + +++ LA++l+L rqV vWFqNrRa+ k XP_023904346.1 129 RKKLRLTKEQSALLEESFKQHSTLNPQkQKQALARQLNLRPRQVEVWFQNRRARTK 184 788899******************97527899**********************98 PP | |||||||
2 | HD-ZIP_I/II | 119.8 | 1.4e-38 | 129 | 219 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLep.erKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq++lLEesF+++++L+p ++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l XP_023904346.1 129 RKKLRLTKEQSALLEESFKQHSTLNPqKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 219 69***********************945799*********************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MDFNDVCNTG LVLGLGLTAS AQESSSPSKA PKNKACSNFT PTGFEPSLTL GLSGESYHQV 60 IPRKIIDVKK GYEESIDLYR QASPPHSAVS SFSSGRVKRE RDLSSEEVEA VDRVSSRISD 120 EDEDGPNARK KLRLTKEQSA LLEESFKQHS TLNPQKQKQA LARQLNLRPR QVEVWFQNRR 180 ARTKLKQTEV DCEFLKKCCE TLTDENRRLQ KELQELKALK LAQPLYMHMP AATLTM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 179 | 187 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 2e-75 | HD-ZIP family protein |