PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023904205.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 591aa MW: 65819.9 Da PI: 8.2883 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.8 | 8.8e-17 | 54 | 98 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W++ Ed ll +vk++ g+ Wk Ia++++ gRt+ qc ++wqk+l XP_023904205.1 54 GWSEKEDNLLSALVKKYNGKKWKQIAAHIP-GRTDVQCLHHWQKVL 98 6*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 57.2 | 3.8e-18 | 104 | 150 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ +++ vk +G ++W++Ia+ ++ gR +kqc++rw+++l XP_023904205.1 104 KGSWTKEEDDCIIEFVKNYGCKRWSLIAKNLP-GRIGKQCRERWFNHL 150 799*****************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 52.3 | 1.3e-16 | 156 | 198 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ ++ +++++G++ W+ Iar ++ gRt++ +k++w+ XP_023904205.1 156 KDAWTEEEESVIAYYHHKYGNK-WAQIARFLP-GRTDNAIKNHWN 198 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 591 aa Download sequence |
MVKVKKEKEE LAADSAKEVR FASCSSSYGN CDSSVQRCSV IGRPTGPTRR SRRGWSEKED 60 NLLSALVKKY NGKKWKQIAA HIPGRTDVQC LHHWQKVLNP EVVKGSWTKE EDDCIIEFVK 120 NYGCKRWSLI AKNLPGRIGK QCRERWFNHL DPAINKDAWT EEEESVIAYY HHKYGNKWAQ 180 IARFLPGRTD NAIKNHWNCS MKKKLDSYST DGCDTTCETM SPDFSSPETK STSPDFCSSS 240 TKHECTKVKV EKLNFNKMFS LNHSMELEHN VDTCSTDLVL GNAYGGEIHL MAKRGEPELV 300 DPLNGTQSNR KGAAASGITT RSSIHNVSHD ETDGPLVATF LDVFLDASTY TKQNHIPVAH 360 KILETPKSLR EYASGVMNSR MANGSGNPCS TSLALGLDEH MGQVGKKNQV HRVSQHAVDK 420 NHAYLPSESP LVNAVEDSGG SPSTYVHFRH PNTPFCYSTP TYLGQSMYAN GSSPESTLRN 480 SAMTFKNTPS IIRKRTSRKT GNANLPDVTC TPESTVTSIC DRQYVNSTNF INTKQGFLSF 540 FVETETSVAV RSMERCLEYA FDLEKESVAV KCGKSVSASM SPNFDICSNT M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 5e-74 | MYB family protein |