PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904164.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 339aa MW: 38171.9 Da PI: 4.9873

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.8	5.2e-10	169	221	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 +++ hn+ Er RR+++Ns++ L +llP + +skK s i + +Y+ +L XP_023904164.1 169 KKQDHNAKERVRRKNLNSSYLALGSLLPDsR---RSKKrWSAPVIMDRILDYVPEL 221 6899*************************66...8888799999999988888766 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MDHLDAWPGL DPLYLETSDN LWPLLGESSI SKPSELADNI NDVLDPSVFL AQEHSALVES 60 RNNIDEGLQE NDLIFHKDDN LSTILDASNN PWPFPQESNI DHDTNCALDS SMLLDQELPV 120 PLADSTTEKV MSGKGLNSKR TRERNHGLKR IQPRKKVVEP NAEEGSASKK QDHNAKERVR 180 RKNLNSSYLA LGSLLPDSRR SKKRWSAPVI MDRILDYVPE LENEIKKLTL RKKDMLSALE 240 NQQNLDQTPH IKVQAPTVSV HEVKEGQVII QICLQKDRED VLSNLIRNLE AEDMCIKSAS 300 TFHISDDSSS YHLHVEMDGS SLGAECIGVL KEKVTSWLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	2e-32	bHLH family protein