PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904084.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 282aa    MW: 31258.3 Da    PI: 8.2649
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.41.5e-3272128259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     + vrYkeClkNhAas+Gg+a+DGCgEfmps geegt++al+C+AC+CHRnFHR+eve 
  XP_023904084.1  72 KVVRYKECLKNHAASMGGNATDGCGEFMPS-GEEGTIEALNCSACNCHRNFHRKEVEG 128
                     679**************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MELSSQEGEI PIPINSTYAG HGHHGHGHGH GHMIHHDPVP HNHIIPSSAP QIPSNGPPLP  60
TSLEDHVPYN KKVVRYKECL KNHAASMGGN ATDGCGEFMP SGEEGTIEAL NCSACNCHRN  120
FHRKEVEGEP SSCDCHHSPH LNRRKFIFGH HKNLLAPEAL GYPTATGTFI SSRAPPPHQM  180
IMSYNMGSLP SESDEQEDGG ANGGVVVARP PQLVKKRFRT KFTQEQKEKM LNFAEKVGWK  240
IQKQEEAVVQ QFCQEIGVKR RVLKVWMHNN KHNLAKKNPS TA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.16e-80ZF-HD family protein