PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023903759.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 265aa MW: 28972.5 Da PI: 7.1201

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023903759.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.5	3.7e-14	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+ + + +G+g +W t + + g++R++k+c++rw++yl XP_023903759.1 14 KGPWSPEEDATLKGYLQNYGTGgNWMTLPTRAGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	44.6	3.3e-14	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd + + q+G++ W+ Ia+ ++ gRt++++k++w++ XP_023903759.1 69 GGFTEEEDNTICTLYSQMGSR-WSFIASQLP-GRTDNEVKNHWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDATLKGYLQ NYGTGGNWMT LPTRAGLRRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNTIC TLYSQMGSRW SFIASQLPGR TDNEVKNHWN TKLKKKLLTI 120 NNEESPPNNP TLYGSTPTTS LICVPKAETY SFGISASQSQ NPTDVIPRLS TKFNSLSSDP 180 IPLYCPELID VSEVGASSKN STCAVSLSQE SSCISNSSSI GLVTSVSMAG NVEVQDSKAL 240 VDFSFGSPYG LGNSLYLADF TYPEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	4e-67	MYB family protein