PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023903491.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 1015aa MW: 111092 Da PI: 5.6847 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.9 | 2.3e-18 | 37 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_023903491.1 37 KGQWTPEEDEILQKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 64.4 | 2.2e-20 | 89 | 135 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde ++++vk++G++ W+tIa++++ gR +kqc++rw+++l XP_023903491.1 89 KGPWSKEEDEVIIELVKKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 48.6 | 1.8e-15 | 141 | 183 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_023903491.1 141 KEAWTQEEELALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 183 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1015 aa Download sequence |
MEGDRKISTT QDGLGDASQK MRALQGRTSG PTRRSTKGQW TPEEDEILQK AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI IELVKKYGPK KWSTIAQHLP 120 GRIGKQCRER WHNHLNPSIN KEAWTQEEEL ALIRAHQIYG NRWAELTKFL PGRTDNAIKN 180 HWNSSVKKKL DSYLASGLLA HYPVLPHVGH RNQSMLSSSS RMQSSGDDSG LKGIEGEEIS 240 ECSQDSTVAG CFQSASEMAN AVLHNIEELP LTQESGLAKE QNSSPLSCSE QYYTSLEDVA 300 FSMPDISCEA GCPDKLLEQN FSHDAKASVS RENKFNAHGL PNISSLELGQ DSSQLQTHCI 360 STNESHEMVN VPCQASTSMG YMAMGSYNKA EHMLIPDDEC CRVLFSEAMN DGNFFTGNLT 420 KGSNMVASVG GTDSFRCQSS NSMISETVAT SASQSYCPPR SDIIGTSCSQ HFVPAPSLIS 480 VDGGTLIYSD EPNQLFETQE QEFVISAPDG FVYTKDSPNS PCNNGTKNTG LQEQPDFVKE 540 PSKLVPVNSF GSGSDINHTC PSLGEGSYVH TEQQDVGALC YEPPRFPSLD IPFFSCDLVQ 600 SGSDMQQQEY SPLGIRQLMM SSMNCLTPFR LWDSPSRDDS PDAVLKSAAK TFTGTPSILK 660 KRHRDLLSPL SDRRIDKKLE IDMTSSLARD FSRLDVMFAD SGTQKAPLLS PSSNRKKNSG 720 TSTDDKENLD HAFEEGDEGV AHIQSSGVLV EHDMNNLLLN SPDQVGSKAD RALLGSSAGT 780 PRNQQSRSLG AASNQGIPNK SSFGNPCAPV SSPTVCVKKH ESHSVGVTCL QSASLSVPLE 840 NRSDNAGNDA SFETFGMFGG TPFKRSIESP SAWKSPWFIN SFLPGPRVDT DITIEDIGYL 900 MSPGDRSYDA IGLMKQISEQ SAAAYANAQE VLGNETPKTL LKGKSINQGN LDRENSHMPH 960 DPLGNRSHLA PNVLTECRIL DFSECGTPAK GTENSRSSNA LSFSSPSSYL LKGCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.2 | 0.0 | MYB family protein |