PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023903336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 25347.2 Da PI: 4.3971 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.7e-17 | 74 | 123 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 + y+GVr++ g+WvAeI++p + r k+ +lg+f+ta++Aa a+++a+++++ XP_023903336.1 74 CNYRGVRQRT-LGKWVAEICEP---N-ReKKLWLGTFDTADDAASAYDEAARAMY 123 56*****999.8******9998...3.46**********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MGYLDQGVPM ESSKKRKTRG DGFSVAETLA KWRDHNAQLL ESSGDDVKRA RKLSYKGPKK 60 GCMKGKGRAE NLQCNYRGVR QRTLGKWVAE ICEPNREKKL WLGTFDTADD AASAYDEAAR 120 AMYAAAARLN FPESVSTMSG PTPAGYEASV GESTSSLVKD ESTDNGQEEL LAFFENELFD 180 VAELMALLEN NLDFTDSVLD FGFDVNQLGF PDTEADLPSL VDTEGRDEPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.1 | 2e-22 | ERF family protein |