PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023903104.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 330aa MW: 37428.9 Da PI: 6.8324

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023903104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.2	1.8e-28	169	223	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt++LHe+Fv++v++LGG+ekA Pk+ilelm+ + Lt+ +vkSHLQkYR+ XP_023903104.1 169 KKRIKWTQDLHEQFVKCVNRLGGAEKAKPKAILELMDTNLLTIFNVKSHLQKYRT 223 68****************************************************8 PP
2	Myb_DNA-binding	40.4	6.7e-13	173	222	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +WT++++e++v++v++lGg +k+I + m + +t ++ks++qky+ XP_023903104.1 173 KWTQDLHEQFVKCVNRLGGAekaKPKAILELMDtNLLTIFNVKSHLQKYR 222 8***************99**********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MDDFSQLYCT EPPLITPAMN DSFKSLASAF HAAESYMEFQ QKYEHRVGNS PSASQFPTYD 60 SHILSSCQSS GDNNCSTDSA EQSSSNFDFK DSLQSLVKSH LCSNYYCSSS EMSNLVTSNN 120 SGKPFPHDQN MLLCENAAFV RRQLSVPDHA NQALNVCQSS STGPAPSNKK RIKWTQDLHE 180 QFVKCVNRLG GAEKAKPKAI LELMDTNLLT IFNVKSHLQK YRTAVHMPDY SVEEISERRT 240 RADGRIPHQL PMKISMQMKE TLQLQLEVER SLNEQLEVQQ NLQLLIEEQR RQLKMMLDQQ 300 KKNCKSLFKS QNSDLSSQRQ SDQCASSEGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	1e-37	G2-like family protein