PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023902577.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 821aa MW: 89602.9 Da PI: 6.1583

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023902577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.3	2.2e-07	71	118	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++tkeq ++Le++F+++++p+++ ++ +++lg++ ++V NrRak k+ XP_023902577.1 71 RLTKEQHDILEAHFQEQNKPNTNIKKAFSESLGVSLEKVN----NRRAKSKQ 118 58***********************************5....9**996 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
MSAVSRPYPL SYTRDPPAIA LPEMEYLDFG RQAGYPDHYN PHANPTLEDM HKSSYYSSNM 60 TAALACDTKP RLTKEQHDIL EAHFQEQNKP NTNIKKAFSE SLGVSLEKVN NRRAKSKQDA 120 KKQQGAINLF QQQQEGTAPA DWDSSTEVSP AFLSSEYASM MQHCGPSDSS ADSLPRSMVM 180 PQQPQAATEA DAPFHGFLSA NPTDQYAAYG MPQSQPELFD SPQELNRRTL TQEQFDAIAQ 240 NGDLMQGYDN YDLFQPPLAH SVSLSAESFL SNGEVQQLYT FGNSLAMAEL VPAHDSTGFS 300 NSSEQSFLST SQFQERDSMS NTASDWSDSS SSSVNGMQPE APHEPIKSQW QPGQSVEVDF 360 KALNEQFQQV AQARLAAQEQ PLAFPNDEAF AQGDSQTTML AHNMSHVGID TPQPHPNGVF 420 KGPAPPSSIA ARRQRPRPAA LGLASLRSQS YSGATQPNSP NHATQNNAAS GQSLRRIRSS 480 NIIGGVSQGR IQKASGPAQR SPLNRSFPES LGSPKALRHA SHAAGSNLAP PTPMSPQFPR 540 VESTRPGNPW QTSAAGHVSR PPSISEHDAE REVSYAPQQT VLPPQKFSSP PHTPMYYQQQ 600 FMPQHIANNF HIENTPPQSA PASQPCFSMS YPTSNTVQPQ AVLQQQAISY APVQPQPIIN 660 SIAPEQQLNM TSAAYLPVQP FNVPVPTVPE DITMRYPYGV PIINASGQMQ MGFPPQLQLL 720 QQLQASQMTA ASQVPLTQFN APGSSPEART TRRPAPEFEV HEYTPSDILK RGAGPHKAID 780 TGPKNYTFAN QGPEHFDKGK KSSESNNSSV TDERSCQVSN P

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

MSAVSRPYPL SYTRDPPAIA LPEMEYLDFG RQAGYPDHYN PHANPTLEDM HKSSYYSSNM  60
TAALACDTKP RLTKEQHDIL EAHFQEQNKP NTNIKKAFSE SLGVSLEKVN NRRAKSKQDA  120
KKQQGAINLF QQQQEGTAPA DWDSSTEVSP AFLSSEYASM MQHCGPSDSS ADSLPRSMVM  180
PQQPQAATEA DAPFHGFLSA NPTDQYAAYG MPQSQPELFD SPQELNRRTL TQEQFDAIAQ  240
NGDLMQGYDN YDLFQPPLAH SVSLSAESFL SNGEVQQLYT FGNSLAMAEL VPAHDSTGFS  300
NSSEQSFLST SQFQERDSMS NTASDWSDSS SSSVNGMQPE APHEPIKSQW QPGQSVEVDF  360
KALNEQFQQV AQARLAAQEQ PLAFPNDEAF AQGDSQTTML AHNMSHVGID TPQPHPNGVF  420
KGPAPPSSIA ARRQRPRPAA LGLASLRSQS YSGATQPNSP NHATQNNAAS GQSLRRIRSS  480
NIIGGVSQGR IQKASGPAQR SPLNRSFPES LGSPKALRHA SHAAGSNLAP PTPMSPQFPR  540
VESTRPGNPW QTSAAGHVSR PPSISEHDAE REVSYAPQQT VLPPQKFSSP PHTPMYYQQQ  600
FMPQHIANNF HIENTPPQSA PASQPCFSMS YPTSNTVQPQ AVLQQQAISY APVQPQPIIN  660
SIAPEQQLNM TSAAYLPVQP FNVPVPTVPE DITMRYPYGV PIINASGQMQ MGFPPQLQLL  720
QQLQASQMTA ASQVPLTQFN APGSSPEART TRRPAPEFEV HEYTPSDILK RGAGPHKAID  780
TGPKNYTFAN QGPEHFDKGK KSSESNNSSV TDERSCQVSN P