PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023902305.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 307aa MW: 34007.2 Da PI: 8.6846 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43 | 1e-13 | 94 | 138 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky XP_023902305.1 94 PWTEDEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 138 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MEMKSETCGN GEIILFGVRV VVDSMRKSVS MNNLSQYEQP QPQPQQPHQD GEASNNSSNK 60 IQSKDDVAAG YASADDAAPS SRATRERERK RGVPWTEDEH KLFLLGLQKV GKGDWRGISR 120 NFVKTRTPTQ VASHAQKYFL RRTNLNRRRR RSSLFDITTD TVTAIPMEEE PGYNNQDNVS 180 NSHSLPPPPP EKCNFNGYPM MPAFPMTVGP AVVPVPIENP MENLSLGHGN LDINASSKLV 240 RPIPIHTATH AATITDLNLN WKLANDPSPL TLKLSLTSDQ RESPSRHPSA FQAMPNFNNG 300 DSIITVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74840.2 | 4e-52 | MYB_related family protein |