PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023902305.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 307aa    MW: 34007.2 Da    PI: 8.6846
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023902305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431e-1394138347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_023902305.1  94 PWTEDEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 138
                      8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MEMKSETCGN GEIILFGVRV VVDSMRKSVS MNNLSQYEQP QPQPQQPHQD GEASNNSSNK  60
IQSKDDVAAG YASADDAAPS SRATRERERK RGVPWTEDEH KLFLLGLQKV GKGDWRGISR  120
NFVKTRTPTQ VASHAQKYFL RRTNLNRRRR RSSLFDITTD TVTAIPMEEE PGYNNQDNVS  180
NSHSLPPPPP EKCNFNGYPM MPAFPMTVGP AVVPVPIENP MENLSLGHGN LDINASSKLV  240
RPIPIHTATH AATITDLNLN WKLANDPSPL TLKLSLTSDQ RESPSRHPSA FQAMPNFNNG  300
DSIITVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.24e-52MYB_related family protein