PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023902256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26209.9 Da PI: 9.9222 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.8 | 3.6e-20 | 53 | 102 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + + +r++lg+f tae Aa a+++a+++++g XP_023902256.1 53 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAESAALAYDEAALRFKG 102 7********.**********9...3.35***********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 236 aa Download sequence |
MSVMVSALAQ VISNTDQNPV QVHGNPIITS QSGPREQHQS QPAVDQGNTR RRHYRGVRQR 60 PWGKWAAEIR DPNKAARVWL GTFETAESAA LAYDEAALRF KGSKAKLNFP ERVQGTSETG 120 YLTTGLGTEQ VPNQILHHAP HQTTSQQTYP NMFQYAQLLQ TGDSSLHYVN VPSLYGQERF 180 ASQTSSTTTS SSSSSSSPMP TQQQQQYQQQ ELLRFPTHFG GGSPTSSNPR KNMKDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G61890.1 | 9e-38 | ERF family protein |