PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023902121.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NF-X1

Protein Properties

Length: 582aa MW: 64408.3 Da PI: 7.9715

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023902121.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	16.2	2.2e-05	334	351	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C + CHeG C+ C XP_023902121.1 334 CGEHECARSCHEGLCGAC 351 ****************99 PP
2	zf-NF-X1	17.7	7.7e-06	476	493	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG H+C+ +CH G+CppC XP_023902121.1 476 CG-HSCGGICHVGDCPPCM 493 .*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MEGSASAVST NGQAAIQDAS HQRGSRTQRR VRGRGRGRGG NASMNFRPAS VAPSSTTESE 60 PHRENNTVSS HSTNRGRRQR DNKTRRQDRT VNGRQFGGQL TTQTASTTIT PESSQFQANA 120 TPFVPGQQHM VASNPSILHK KPQKVYNQPK KQLEKSQAPD IATRTHDDID NGHYECAICT 180 SEVQRKAKVW SCHLCWTVFH LSCIKKWSGN EGSAVTRNQS DEVAPWQWRC PGCNLPQDEL 240 PILYTCWCGK DVEPRAPAGI PPHSCGQSCG KERAKKCPHA CSLTCHAGPC PPCDFMGPTQ 300 MCYCGKHEVT KRCSETDYDN GWSCGEICGE LMPCGEHECA RSCHEGLCGA CDVRVPARCY 360 CGKEEKDIFC SDRMKSKTSH RTYLEEAGEA ATESWEGEFE CTNDCGRPMD CGVHFCKRSC 420 HATSTDKPAH CVRSPDVVTH CSCGKTLLET LTDRPRETCE DPIPSCRMSC GKSLPCGHSC 480 GGICHVGDCP PCMQKIDIKC RCGRTTSRSL CHQDESDLSH PQCPRVCRIQ MSCGRHACDE 540 RCCTGERKAI ERQSSKRKQR PFSATPRVFD DGFEAEHICT RQ

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MEGSASAVST NGQAAIQDAS HQRGSRTQRR VRGRGRGRGG NASMNFRPAS VAPSSTTESE  60
PHRENNTVSS HSTNRGRRQR DNKTRRQDRT VNGRQFGGQL TTQTASTTIT PESSQFQANA  120
TPFVPGQQHM VASNPSILHK KPQKVYNQPK KQLEKSQAPD IATRTHDDID NGHYECAICT  180
SEVQRKAKVW SCHLCWTVFH LSCIKKWSGN EGSAVTRNQS DEVAPWQWRC PGCNLPQDEL  240
PILYTCWCGK DVEPRAPAGI PPHSCGQSCG KERAKKCPHA CSLTCHAGPC PPCDFMGPTQ  300
MCYCGKHEVT KRCSETDYDN GWSCGEICGE LMPCGEHECA RSCHEGLCGA CDVRVPARCY  360
CGKEEKDIFC SDRMKSKTSH RTYLEEAGEA ATESWEGEFE CTNDCGRPMD CGVHFCKRSC  420
HATSTDKPAH CVRSPDVVTH CSCGKTLLET LTDRPRETCE DPIPSCRMSC GKSLPCGHSC  480
GGICHVGDCP PCMQKIDIKC RCGRTTSRSL CHQDESDLSH PQCPRVCRIQ MSCGRHACDE  540
RCCTGERKAI ERQSSKRKQR PFSATPRVFD DGFEAEHICT RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	1e-82	NF-X1 family protein