PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901785.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 303aa    MW: 34853.3 Da    PI: 9.5988
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.86e-16261061399
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     s r+++p kf++e+g +   s+  +l+ + grsW v l  +k ++ +++ +GWk+Fv+ + ++ g f+vF+++g+s+f  +v vf+k
  XP_023901785.1  26 SLRISIPEKFVREFGDE--LSTVSKLTVPYGRSWLVGL--EKVDKNIWFCDGWKDFVEYHSICYGYFLVFEYQGNSNF--HVLVFDK 106
                     5589**********865..888999*************..**********************************9999..****998 PP
2B358.98.9e-192092941198
                     HHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  11 lksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     + ++++++p +fa +h  g++       +le+++gr+W+v++  r++  + + +++GW  F+++n+L+egD++vF+l++r+   l+v++fr
  XP_023901785.1 209 MHKHIMYIPGRFAIKHlcGSQ-----IAKLETPDGRQWSVNCHKRGRLTSaMNIGRGWIVFARENNLEEGDVCVFELIKRKPVVLNVSIFR 294
                     56789***********76544.....69**************6655555578899*************************9999****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGETRNQIKL KKFNKSDWSV LPILASLRIS IPEKFVREFG DELSTVSKLT VPYGRSWLVG  60
LEKVDKNIWF CDGWKDFVEY HSICYGYFLV FEYQGNSNFH VLVFDKTATE IQYPLSKNCK  120
LEDQVDIMEL DDANISMHNK NENEMSNSDD ELPTSHKEVG EKSVKKQISG MSSKGKLMMS  180
RGRERAIQAA RRLRPKNPSF MGIIGRVNMH KHIMYIPGRF AIKHLCGSQI AKLETPDGRQ  240
WSVNCHKRGR LTSAMNIGRG WIVFARENNL EEGDVCVFEL IKRKPVVLNV SIFRVVDYAL  300
PVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-45B3 family protein