PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901726.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 549aa MW: 60242.9 Da PI: 9.0836

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	44.8	2.2e-14	46	102	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR + ++ +Le++++++++p++ +r eL k + L e+ V++WFqNrR+ ++ XP_023901726.1 46 RTKRKRTSPGDQATLEAAYARDPKPDKVKRLELVKLVALGEKEVQIWFQNRRQSSRR 102 56788888888999***************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MDVPAEVPEP GPSLMAAQAV PTSGQHPAVA VAESTLLAID ERPSGRTKRK RTSPGDQATL 60 EAAYARDPKP DKVKRLELVK LVALGEKEVQ IWFQNRRQSS RRKSRPLMPH EIAQYQLSRS 120 SAGSCNTSSD PVEFDPSHST DQDITPPERD HDDSPCGTQN SCDLIYDRDP NSTNHLWTFE 180 DTAPSLVALP APSNVTKVTA KIPETGDIHM FPVTVGPTSS QSESQYSHEQ STPIGYFANR 240 RSEASFSAPR PLESKSDSFM NHKMASSVEY SVGHAAELPK KHPPRVHLSM SSEGKATITT 300 KDGTSPSPSR AKQAMRPFVS STHDLKNVDN SILAGSERKP LQRSASGRSR DSRAWEFWCD 360 KDTRTELEGR AEKESSGSAA DAIGLLRSSS GRSVLGPLAN KRNPTLFRDA SDTKKPRLDP 420 SKRPPLRRAS TSFGRLQSKS VHRKLARPTL KYSESAVSVY IPGNDSDKEN WSPERNISAA 480 QDKSSVLGKI DHEPFPTATV TGTRRGNEHD LVVDAELVHS TRRDRKSVSS EDDLDCVQGL 540 LSLSQGNWR

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MDVPAEVPEP GPSLMAAQAV PTSGQHPAVA VAESTLLAID ERPSGRTKRK RTSPGDQATL  60
EAAYARDPKP DKVKRLELVK LVALGEKEVQ IWFQNRRQSS RRKSRPLMPH EIAQYQLSRS  120
SAGSCNTSSD PVEFDPSHST DQDITPPERD HDDSPCGTQN SCDLIYDRDP NSTNHLWTFE  180
DTAPSLVALP APSNVTKVTA KIPETGDIHM FPVTVGPTSS QSESQYSHEQ STPIGYFANR  240
RSEASFSAPR PLESKSDSFM NHKMASSVEY SVGHAAELPK KHPPRVHLSM SSEGKATITT  300
KDGTSPSPSR AKQAMRPFVS STHDLKNVDN SILAGSERKP LQRSASGRSR DSRAWEFWCD  360
KDTRTELEGR AEKESSGSAA DAIGLLRSSS GRSVLGPLAN KRNPTLFRDA SDTKKPRLDP  420
SKRPPLRRAS TSFGRLQSKS VHRKLARPTL KYSESAVSVY IPGNDSDKEN WSPERNISAA  480
QDKSSVLGKI DHEPFPTATV TGTRRGNEHD LVVDAELVHS TRRDRKSVSS EDDLDCVQGL  540
LSLSQGNWR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	48	74	KRKRTSPGDQATLEAAYARDPKPDKVK