PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901705.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 294aa    MW: 34268.5 Da    PI: 10.4037
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901705.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.55.7e-1928117298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fk+   s++ +   l+lp kf++e+g+k   s+  tl++++g  W+v+l  +k  + +++ +GW++Fv+ + ++ g f+vFk++g+s+f  +v v
  XP_023901705.1  28 FKII-LSSTIRDMKLRLPEKFVKEYGNK--LSIVATLTNPNGSIWQVRL--EKANNNIWFHGGWRDFVDYHSINYGYFLVFKYKGNSKF--HVLV 115
                     5555.467777778***********977..99*****************..99999*****************************9999..9999 PP

                     E- CS
              B3  97 fr 98 
                     f+
  XP_023901705.1 116 FD 117
                     87 PP
2B362.66.2e-20198289598
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      +++++lk++ +++  +fa+++ + k+    ++l+ + g++W  +++yr +s +  +++kGWk+Fv++ng+k+gD++vF+l++r++  l+v++fr
  XP_023901705.1 198 VIQAYNLKLSYVYVTTEFAKKYVQRKN---FVKLQASGGKRWPCQFSYRDGSATpKTIGKGWKSFVRDNGIKVGDVCVFELISRMDVVLKVSIFR 289
                     578999****************65554...5*****************877777799******************************9****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAPRTCRRRL GPNWDHHRPS RCRHSHFFKI ILSSTIRDMK LRLPEKFVKE YGNKLSIVAT  60
LTNPNGSIWQ VRLEKANNNI WFHGGWRDFV DYHSINYGYF LVFKYKGNSK FHVLVFDMTA  120
TEIEYPSNRD KKRQGNLNEH EMSTSRELCV EHEVDTELII IENSPMSSTR GSVLSGRRER  180
ALQAARMFKP KNPSFICVIQ AYNLKLSYVY VTTEFAKKYV QRKNFVKLQA SGGKRWPCQF  240
SYRDGSATPK TIGKGWKSFV RDNGIKVGDV CVFELISRMD VVLKVSIFRM AEYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-32B3 family protein