PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901659.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 310aa    MW: 35866.4 Da    PI: 9.0788
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.91e-1432123199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +ps     + l++pkkf++e+g +   s+  tl+ ++g  W+v l  +k+   +++ +GW++ v+   ++   f+vF+++g+s+f  +v+
  XP_023901659.1  32 FFKIILPSTIQDMK-LRIPKKFVKEYGDE--LSTIATLTIPNGDIWQVGL--EKSNMNILFCDGWRDLVEYYSICYWYFLVFRYEGNSNF--YVH 119
                     78888777777666.***********966..89999**************..999999****************************9999..*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+k
  XP_023901659.1 120 IFDK 123
                     **98 PP
2B345.71.2e-142263051597
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                      ++lp +f  ++g++    + +tl++++g++W v + y +  s ++ ++kGW  F k+n+L+  D++vF+++ r+   l v++f
  XP_023901659.1 226 YMYLPGEFSMNIGQN----QIVTLQTPDGKQWCVWCYYyKPPSLTMRMGKGWTAFSKDNNLEKCDVCVFEVITRKPVVLSVTIF 305
                     589999999777744....47***************76466666699***********************99888887888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MTKTRKSRVH NRNCDQPPSS SMAGRVRTPS NFFKIILPST IQDMKLRIPK KFVKEYGDEL  60
STIATLTIPN GDIWQVGLEK SNMNILFCDG WRDLVEYYSI CYWYFLVFRY EGNSNFYVHI  120
FDKTAIEIQY PPSKNSKLED QVDIIDLDDT NTSSHDMLNE NEMSNSVELP TKHKEVREKF  180
VGKKISGMSS KGKLMMSRGK ERTIQAARML KPKNASFVGI MLPSYYMYLP GEFSMNIGQN  240
QIVTLQTPDG KQWCVWCYYY KPPSLTMRMG KGWTAFSKDN NLEKCDVCVF EVITRKPVVL  300
SVTIFHVVDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-30B3 family protein