PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023901639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | B3 | ||||||||
Protein Properties | Length: 301aa MW: 34717.3 Da PI: 9.8318 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.1 | 5.8e-17 | 13 | 104 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ +ps l++p kf++e+g + s+ +l+ + grsW v l +k ++ +++ +GWk+Fv+ + ++ g f+vF+++g+s+f +v XP_023901639.1 13 FFKIILPSTIQHM-KLSIPEKFVREFGDE--LSTVSKLTLPYGRSWLVGL--EKVDKNIWFCDGWKDFVEYHSICYGYFLVFEYQGNSNF--HVL 100 7777766665555.5***********865..888899999**********..**********************************9999..*** PP EE-S CS B3 96 vfrk 99 vf+k XP_023901639.1 101 VFDK 104 *998 PP | |||||||
2 | B3 | 60.2 | 3.4e-19 | 207 | 292 | 11 | 98 |
HHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + ++++++p +fa +h g++ +le+++gr+W+v++ r++ ++ + +++GW F+++n+L+egD++vF+l++r+ l+v++fr XP_023901639.1 207 MHKHIMYIPVRFAIKHlcGSQ-----IAKLETPDGRQWSVNCHKRGRLSSaMNIGRGWIVFARENNLEEGDVCVFELIKRKPVVLNVSIFR 292 56789***********76544.....69**************665554445999**************************9999****998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MAGRCKSRTP SHFFKIILPS TIQHMKLSIP EKFVREFGDE LSTVSKLTLP YGRSWLVGLE 60 KVDKNIWFCD GWKDFVEYHS ICYGYFLVFE YQGNSNFHVL VFDKTATEIQ YPLSKNCKLE 120 DQVVIMELDD ANISMHNKNE NEMSNSDDEL PANHKEVREK SVKKQISGMS SKGKLMMSRG 180 RERAIQAARR LRPKNPSFMG IIGRVNMHKH IMYIPVRFAI KHLCGSQIAK LETPDGRQWS 240 VNCHKRGRLS SAMNIGRGWI VFARENNLEE GDVCVFELIK RKPVVLNVSI FRVVDYALPV 300 K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 7e-30 | B3 family protein |