PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023901628.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 319aa    MW: 37079.9 Da    PI: 9.838
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023901628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.16.7e-1835126199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +ps + + + l++p kf++e+g +   s   +l+ + g  W v l  +k+++ +++++GW++Fv+ + ++ g f+vF+++g+s+f  +v 
  XP_023901628.1  35 FFKIILPSTMQEMK-LSIPEKFVSEFGDE--LSSVAKLTIPYGHIWHVGL--EKSDKNIWFGDGWQDFVEYHSICYGYFLVFRYEGNSNF--HVL 122
                     89999999999987.***********855..7779***************..**********************************9999..*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     vf+k
  XP_023901628.1 123 VFDK 126
                     *998 PP
2B361.11.8e-19223313598
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     l p+ ++++ ++++p +fa ++     ++k ++l++++g++W  k+i  ++ s+++ +++GW  F ++n+L+egD++vF+l++++   l+v++fr
  XP_023901628.1 223 LRPN-YMQRYIMYVPVQFAVKYLR---QPKIVKLQTSNGKQWPAKCILrDRASSAMNIGRGWTVFSRDNNLEEGDVCVFELIKKQPVVLKVSIFR 313
                     5444.455557***********54...4567***************99777788899*************************9988889999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MAAMSKTGRT RVVPNWKYDH HHWPSSSKSM APSHFFKIIL PSTMQEMKLS IPEKFVSEFG  60
DELSSVAKLT IPYGHIWHVG LEKSDKNIWF GDGWQDFVEY HSICYGYFLV FRYEGNSNFH  120
VLVFDKTATE IQYPLSKNCK LEDQVDIMKL GDAIISMHDK LDENEISDSD ELLTKHEVRE  180
KFLKKRFSGT SSREKFKMSR GRERALQAAR MLKPKNPSFI GVLRPNYMQR YIMYVPVQFA  240
VKYLRQPKIV KLQTSNGKQW PAKCILRDRA SSAMNIGRGW TVFSRDNNLE EGDVCVFELI  300
KKQPVVLKVS IFRVVDYAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-35B3 family protein