PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023901425.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 226aa MW: 24676 Da PI: 7.4383 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36 | 1.6e-11 | 2 | 35 | 12 | 47 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++a++ +G++ W+tIar ++ gRt++ +k++w++ XP_023901425.1 2 IIRAHAWFGNK-WATIARLLN-GRTDNAIKNHWNST 35 6889999****.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MIIRAHAWFG NKWATIARLL NGRTDNAIKN HWNSTLKLKC SSMGDDFNDD VSNPQPLKQS 60 ASVVAATVTG TGLYLNPSSP SESDLSDSSM PATSPSYVFR PVARAVSLVP AHPVETLCST 120 TTDPPTSLSL SLPGSDPFEL ISPAQLVTPL PPQQQQQPPP PPPPKQPVTG YEKQFFSNEF 180 LAVMQEMIRK EVRNYMSGIE QNGFCNLQTD AIRNAVIKRI GISKIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 1e-29 | MYB family protein |