PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901361.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 1776aa MW: 199193 Da PI: 4.9011

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.2	2.8e-18	20	76	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + kR t++qle+Le+ ++ + yps++ r+eL++klgL++rq ++WF+ rR k++k XP_023901361.1 20 KTKRKMKTASQLEILEKTYAVEAYPSEALRAELSAKLGLSDRQLQMWFCHRRLKDRK 76 6799***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1776 aa Download sequence
MEVATGSEGE KKKPPEVENK TKRKMKTASQ LEILEKTYAV EAYPSEALRA ELSAKLGLSD 60 RQLQMWFCHR RLKDRKGPSS GKRQLKDSPA REEMVVAEVG NELGSGSGSA SSLLAESRRV 120 VGRPGVAVAR MGGDVAVMSR YYEPQQTIAE LRAIAFVEAQ LGEPLREDGP ILGMEFDSLP 180 PDAFGAPIGA VTVGQQKQSG RPFEPKLYER PDAKPIKGAG RALHEYQFLP EQPTVRTDAY 240 ERVAPSYHYG SPADGPNART SSVISGRSFM HGNEQVSSGY GFQGQVPGLN LLPNQGRQGH 300 LLPSVSGEYD TVPRKNAFPN IAMDAHFAAH PITQLENPFL PSDRRVTHDE DVPRMERKRK 360 SEEARIAREV EAHEKRIRKE LEKQDILRRK REEQIRKEME RHDRERRKEE ERLLREKQRE 420 EERYQREQRR ELERREKFLQ KESLRAEKLR QKEELRREKE AARLKAANER AIARRIAKES 480 MELIEDERLE LMELATSSKG LPSIVSLDYD TLQNLELYRD MLAVFPPKSV CLKRPFTIQP 540 WTDSEENVGN LLMVWRFLIT FADVLGLWPF TLDEFIQAFH DYDPRLLGEI NIALLRSIIK 600 DIEDVARTPS TGLGTNQYSA ANPGGGHPQI VEGAYAWGFD IRNWQGHLNP LTWPEILREF 660 ALSAGFGPQL KRKNIEQTYL RDDNEGNDGE DVISNLRNGA AVENAVAIMQ ERGFSNPRRS 720 RHRLTPGTVK FAAFHVLSLE GSKGLNILEV AEKIQKSGLR DLTTSKTPEA SIAAALSRDS 780 KLFERTAPST YCVRSAYRKD PADAEAILSM ARERIRIFKS GIVDGEDADD AERDGDSESD 840 GGEDPEVDDL GTETNSNKED QNSKETTEFS ATPLGNGKGS DDVLETPQVS LGNIDEGLFS 900 MKSGGNGDKD SGLFVAQSVD VAGIGNNMVV GNQEDADIDE SNPGESWVQG LMEGEYSDLS 960 VEERLSALVA LIGIAIEGNS IHVVLEERLE AANALKKQMW AEAQLDKRRM KEEFVLRTNY 1020 SSFAGNKAEP NLLTISLAED RQSPLCTTND KNNETSVAPV VEQEQLNNIQ NDQNYLNSLP 1080 SEENLQIHDY PAGPDNLPYQ QPGYAAERSR SQLKYYIGHK AEEMYVYRSL PLGQDRRRNR 1140 YWRFITSASR NDPGCGRIFV ELHDGHWRLI DSEEDFDALL SSLDVRGVRE SHLYTMLQKI 1200 EMSFKESVQM NMRSTMRRHS GDSVKTEAIE MVPGPDFSVG TDSPRSTVCA DSDKSETSTS 1260 FKIELGNNER EKNDALKRYQ DFEKWMWKDC VNSSVIFAMK YGKKRDLQLL STCDYCHDVY 1320 SFEDNHCPSC HKTYSSSWNL NFSEHVSQCE EKPKFDAQNT WHGSLSAPLR IRLLKVQLAL 1380 IEVSIPPEAL QPLWTNSYRK SWGMKLHSSS SAEDLLQALT LLESAIKRDY LSLNFESTTE 1440 LLGSSNPSGG GTDYSFGPET VLILPWIPHT TAAVALRLME FDASISYMLK QKVDSQKDKG 1500 PWVIKLPSKY ATVKNSKDDD TGHTPYQAEH LKEEKWVDSG SGLASSGRGR GGRGRGRGRI 1560 RGGSSQGRVI SSRAESGKRT SATKSDRLGQ ALGWRGRPRG RGGRRRGRRS IRSRQRPAKV 1620 VAVGGERDSS KDIILDKSPS GLEWNGDESM QLPGEDAGST SSSERSDYDY ENGQATGDEY 1680 DDMVVDDFAA GYPGRSDDLL QGTYYNVDVE EEEEEEEEED EDDVDDNEGD AEDEQGDLDI 1740 DEYINGDSDE EGNGGGDREK NLDQDQGTYT SSDYSE

Sequence ? help Back to Top

Protein Sequence Length: 1776 aa Download sequence

MEVATGSEGE KKKPPEVENK TKRKMKTASQ LEILEKTYAV EAYPSEALRA ELSAKLGLSD  60
RQLQMWFCHR RLKDRKGPSS GKRQLKDSPA REEMVVAEVG NELGSGSGSA SSLLAESRRV  120
VGRPGVAVAR MGGDVAVMSR YYEPQQTIAE LRAIAFVEAQ LGEPLREDGP ILGMEFDSLP  180
PDAFGAPIGA VTVGQQKQSG RPFEPKLYER PDAKPIKGAG RALHEYQFLP EQPTVRTDAY  240
ERVAPSYHYG SPADGPNART SSVISGRSFM HGNEQVSSGY GFQGQVPGLN LLPNQGRQGH  300
LLPSVSGEYD TVPRKNAFPN IAMDAHFAAH PITQLENPFL PSDRRVTHDE DVPRMERKRK  360
SEEARIAREV EAHEKRIRKE LEKQDILRRK REEQIRKEME RHDRERRKEE ERLLREKQRE  420
EERYQREQRR ELERREKFLQ KESLRAEKLR QKEELRREKE AARLKAANER AIARRIAKES  480
MELIEDERLE LMELATSSKG LPSIVSLDYD TLQNLELYRD MLAVFPPKSV CLKRPFTIQP  540
WTDSEENVGN LLMVWRFLIT FADVLGLWPF TLDEFIQAFH DYDPRLLGEI NIALLRSIIK  600
DIEDVARTPS TGLGTNQYSA ANPGGGHPQI VEGAYAWGFD IRNWQGHLNP LTWPEILREF  660
ALSAGFGPQL KRKNIEQTYL RDDNEGNDGE DVISNLRNGA AVENAVAIMQ ERGFSNPRRS  720
RHRLTPGTVK FAAFHVLSLE GSKGLNILEV AEKIQKSGLR DLTTSKTPEA SIAAALSRDS  780
KLFERTAPST YCVRSAYRKD PADAEAILSM ARERIRIFKS GIVDGEDADD AERDGDSESD  840
GGEDPEVDDL GTETNSNKED QNSKETTEFS ATPLGNGKGS DDVLETPQVS LGNIDEGLFS  900
MKSGGNGDKD SGLFVAQSVD VAGIGNNMVV GNQEDADIDE SNPGESWVQG LMEGEYSDLS  960
VEERLSALVA LIGIAIEGNS IHVVLEERLE AANALKKQMW AEAQLDKRRM KEEFVLRTNY  1020
SSFAGNKAEP NLLTISLAED RQSPLCTTND KNNETSVAPV VEQEQLNNIQ NDQNYLNSLP  1080
SEENLQIHDY PAGPDNLPYQ QPGYAAERSR SQLKYYIGHK AEEMYVYRSL PLGQDRRRNR  1140
YWRFITSASR NDPGCGRIFV ELHDGHWRLI DSEEDFDALL SSLDVRGVRE SHLYTMLQKI  1200
EMSFKESVQM NMRSTMRRHS GDSVKTEAIE MVPGPDFSVG TDSPRSTVCA DSDKSETSTS  1260
FKIELGNNER EKNDALKRYQ DFEKWMWKDC VNSSVIFAMK YGKKRDLQLL STCDYCHDVY  1320
SFEDNHCPSC HKTYSSSWNL NFSEHVSQCE EKPKFDAQNT WHGSLSAPLR IRLLKVQLAL  1380
IEVSIPPEAL QPLWTNSYRK SWGMKLHSSS SAEDLLQALT LLESAIKRDY LSLNFESTTE  1440
LLGSSNPSGG GTDYSFGPET VLILPWIPHT TAAVALRLME FDASISYMLK QKVDSQKDKG  1500
PWVIKLPSKY ATVKNSKDDD TGHTPYQAEH LKEEKWVDSG SGLASSGRGR GGRGRGRGRI  1560
RGGSSQGRVI SSRAESGKRT SATKSDRLGQ ALGWRGRPRG RGGRRRGRRS IRSRQRPAKV  1620
VAVGGERDSS KDIILDKSPS GLEWNGDESM QLPGEDAGST SSSERSDYDY ENGQATGDEY  1680
DDMVVDDFAA GYPGRSDDLL QGTYYNVDVE EEEEEEEEED EDDVDDNEGD AEDEQGDLDI  1740
DEYINGDSDE EGNGGGDREK NLDQDQGTYT SSDYSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1548	1558	RGRGGRGRGRG
2	1550	1560	RGRGGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein