PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023901031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NF-YA | ||||||||
Protein Properties | Length: 345aa MW: 38519.2 Da PI: 8.5668 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.2 | 4.8e-32 | 166 | 222 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 dep+YVN KQy++Il+RRq Rakle+++kl +ksrkpylheSRh hAl+R+RgsgGrF XP_023901031.1 166 DEPIYVNKKQYHAILRRRQFRAKLEAQDKL-IKSRKPYLHESRHLHALNRARGSGGRF 222 79****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MGREAKCRNP TELQVQQSSM SRNLSLKMGN PPQHCHNTEQ LNFQFQDQDS PSTQSTGQSY 60 PEVVSMQESN PCGQGIVSPK SVFIETKGKA IGGITRQFSL MGTQDIVFSS SKLDHSQSIA 120 CLQFPYSDPY YSLFAATFGH QAIMHPSQMI GMATARVPLP LGFPDDEPIY VNKKQYHAIL 180 RRRQFRAKLE AQDKLIKSRK PYLHESRHLH ALNRARGSGG RFLNKKKLEE SNHTPTSHGL 240 DDSGSPKLHL FANMSESEVH QPENYRDRAS TTSCSDVTSV SNSDDIFQQP EFRFSGYPPH 300 IGGTMHSHSV DMLRVASKQH RLTVLRSPSS SSIFCGEDGC CNLNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 8e-63 | NF-YA family protein |