PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900896.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 247aa    MW: 26948.8 Da    PI: 4.4119
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.1e-1761111155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p   + r kr +lg+f  a +Aa a+++a++ ++g
  XP_023900896.1  61 CNYRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFENAVDAATAYDEAARMIYG 111
                     56*****999.**********8...3.35**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MESSKKRKSR GDGLSVAETL AKWRDYNAQV DSSAKRARKL PAMGSKKGCM KGKGGPENAH  60
CNYRGVRQRT WGKWVAEIRE PNRGKRLWLG TFENAVDAAT AYDEAARMIY GAYARLNFPE  120
SVSTIAGPTP VESEVSADES TATPSTIECT AMPTTSCLVE DESTSYSENE HFDVQELMAL  180
LDNDPLGFMD SELSFGYNGD QPGLPVTEAA VPSTSNLVGT ETNEPTGVDS GQQYLLDFSI  240
DDFFVDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.29e-39ERF family protein