PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900790.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 485aa MW: 53505.4 Da PI: 8.7053

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.8	2.1e-07	355	402	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd++ +G g+W+ I r + Rt+ +++++w+++l XP_023900790.1 355 WTLSEVMKLVDGISDHGIGRWTDIKRNLFsasAYRTPIDLRDKWRNLL 402 ******************************99**********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MPEGKKEESF VSALEDEAIE VENLLAEPKN EHVSVDGVLS FGGENLGKGL QMDDFSCGFE 60 YGLRTNSGGL DSNTTQEGED LQLEVLDGFL DEVEEVDDLE ATHGLSNACE DFLLDIEFEK 120 VELISGPRVG SYVGNSSSES QSPGLSGSSN GAVGISESSA VTIPTSECKN GTINKALTCE 180 LHGGFRSKCG CQTPAEDLAS LELSKFDDFD NDDKSFLEAS KIGGVLREKR LRKPTRRYIE 240 EVSNKKPKCL KGREKYLAAA TKDTSLKVRS HSELHNVRRR ALTVVHGEKP LRVTSIQSVS 300 EVRARRGRPK KQATKQAPIL APESDEEPLS SESEDDRVTK KKSKKHDRRK HQRMWTLSEV 360 MKLVDGISDH GIGRWTDIKR NLFSASAYRT PIDLRDKWRN LLRASGAQKA SKKGVEQKQE 420 HALRPLPTSL LKRVRELAKI HPYPRVRMSK KSSLGQVAPL MLPGPSKGAP SNLGGGRTVR 480 RKNCT

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MPEGKKEESF VSALEDEAIE VENLLAEPKN EHVSVDGVLS FGGENLGKGL QMDDFSCGFE  60
YGLRTNSGGL DSNTTQEGED LQLEVLDGFL DEVEEVDDLE ATHGLSNACE DFLLDIEFEK  120
VELISGPRVG SYVGNSSSES QSPGLSGSSN GAVGISESSA VTIPTSECKN GTINKALTCE  180
LHGGFRSKCG CQTPAEDLAS LELSKFDDFD NDDKSFLEAS KIGGVLREKR LRKPTRRYIE  240
EVSNKKPKCL KGREKYLAAA TKDTSLKVRS HSELHNVRRR ALTVVHGEKP LRVTSIQSVS  300
EVRARRGRPK KQATKQAPIL APESDEEPLS SESEDDRVTK KKSKKHDRRK HQRMWTLSEV  360
MKLVDGISDH GIGRWTDIKR NLFSASAYRT PIDLRDKWRN LLRASGAQKA SKKGVEQKQE  420
HALRPLPTSL LKRVRELAKI HPYPRVRMSK KSSLGQVAPL MLPGPSKGAP SNLGGGRTVR  480
RKNCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	8e-25	MYB_related family protein