PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900789.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 500aa MW: 55400.7 Da PI: 9.4343

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900789.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.8	2.2e-07	370	417	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd++ +G g+W+ I r + Rt+ +++++w+++l XP_023900789.1 370 WTLSEVMKLVDGISDHGIGRWTDIKRNLFsasAYRTPIDLRDKWRNLL 417 ******************************99**********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MDKKVHFHKK VANMKCQRVK KEESFVSALE DEAIEVENLL AEPKNEHVSV DGVLSFGGEN 60 LGKGLQMDDF SCGFEYGLRT NSGGLDSNTT QEGEDLQLEV LDGFLDEVEE VDDLEATHGL 120 SNACEDFLLD IEFEKVELIS GPRVGSYVGN SSSESQSPGL SGSSNGAVGI SESSAVTIPT 180 SECKNGTINK ALTCELHGGF RSKCGCQTPA EDLASLELSK FDDFDNDDKS FLEASKIGGV 240 LREKRLRKPT RRYIEEVSNK KPKCLKGREK YLAAATKDTS LKVRSHSELH NVRRRALTVV 300 HGEKPLRVTS IQSVSEVRAR RGRPKKQATK QAPILAPESD EEPLSSESED DRVTKKKSKK 360 HDRRKHQRMW TLSEVMKLVD GISDHGIGRW TDIKRNLFSA SAYRTPIDLR DKWRNLLRAS 420 GAQKASKKGV EQKQEHALRP LPTSLLKRVR ELAKIHPYPR VRMSKKSSLG QVAPLMLPGP 480 SKGAPSNLGG GRTVRRKNCT

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MDKKVHFHKK VANMKCQRVK KEESFVSALE DEAIEVENLL AEPKNEHVSV DGVLSFGGEN  60
LGKGLQMDDF SCGFEYGLRT NSGGLDSNTT QEGEDLQLEV LDGFLDEVEE VDDLEATHGL  120
SNACEDFLLD IEFEKVELIS GPRVGSYVGN SSSESQSPGL SGSSNGAVGI SESSAVTIPT  180
SECKNGTINK ALTCELHGGF RSKCGCQTPA EDLASLELSK FDDFDNDDKS FLEASKIGGV  240
LREKRLRKPT RRYIEEVSNK KPKCLKGREK YLAAATKDTS LKVRSHSELH NVRRRALTVV  300
HGEKPLRVTS IQSVSEVRAR RGRPKKQATK QAPILAPESD EEPLSSESED DRVTKKKSKK  360
HDRRKHQRMW TLSEVMKLVD GISDHGIGRW TDIKRNLFSA SAYRTPIDLR DKWRNLLRAS  420
GAQKASKKGV EQKQEHALRP LPTSLLKRVR ELAKIHPYPR VRMSKKSSLG QVAPLMLPGP  480
SKGAPSNLGG GRTVRRKNCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-24	MYB_related family protein