PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900597.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 855aa MW: 94660.6 Da PI: 7.8946

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900597.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.5	1.2e-18	303	402	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l++sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++ XP_023900597.1 303 FEKMLSHSDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRLE-PEGK 395 89************************555566778***********99899999999.*******************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_023900597.1 396 LVMGFRK 402 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 855 aa Download sequence
MSSASSSAKV CYNSECKELK SERARKGWKL RNGEFADLCD RCASVYEEGR FCETFHLSST 60 GWRCCETCGK QVHCGCIVSS HAFTLLDPGG IECMTCARKN VPWSNPAWPT SLCFHPPLQE 120 RLKDLSVKNW NQLAGSGPVP WRQAPSLFNS SIPASEQSRF PYEVDISGGI NKLNANDRLS 180 ASPLEKKKIE DLSERLMNGN LKLGSREIFD NGNAGIKSEE NHSSCLSQQS SSLKEDPSTP 240 QFGLTAPHAS PNETNAQIGV RNGRPRVDAR GRSLLLPRYW PRFTDQELQQ ISGDSNSVIT 300 PLFEKMLSHS DAGRIGRLVL PKKCAEAYFP PISQPEGLPL KVQDAKGKEW IFQFRFWPNN 360 NSRMYVLEGV TPCIQSMQLQ AGDIVTFSRL EPEGKLVMGF RKASNAPPSD QDHDSNKTMN 420 GVSTHGDAEL ADPSSWSKVD KSGYIAKEVL GAKSSISRKK KNSTLRAKSK RVRIENEDLI 480 QLKITWEEAQ VLLRPPSNHL PSVVVIEGFE FEEYEDAPIL GKPTIFAANN LGEKIQWVQC 540 EDCFKWRKLP ASALLPSKWT CSDNSWDPER SVCSAAQELT AEQLEDLLPH CNLGATRKMK 600 ATKRDPDNVE ALEGLDTLAN LAILGEGETL PASSQATTKH PRHRPGCSCI VCIQPPSGKG 660 PKHKQSCTCN VCQTVKRRFR TLMMRREKKQ SEKEAETIRK KQHQQQPRQL PVPEKLQDDD 720 SLLYNNTGNS SPKQIREINE VSDDEPNKMK SSSSPFKGQI DLNIQPEREE ELSPGSDSGS 780 MMKLLQDATE RYLKQQRLSS SGGNSSANQS HPSGDVAGGE KLTNIINLGS NHSDADEDRP 840 VSLSIKASAS TPAAG

Sequence ? help Back to Top

Protein Sequence Length: 855 aa Download sequence

MSSASSSAKV CYNSECKELK SERARKGWKL RNGEFADLCD RCASVYEEGR FCETFHLSST  60
GWRCCETCGK QVHCGCIVSS HAFTLLDPGG IECMTCARKN VPWSNPAWPT SLCFHPPLQE  120
RLKDLSVKNW NQLAGSGPVP WRQAPSLFNS SIPASEQSRF PYEVDISGGI NKLNANDRLS  180
ASPLEKKKIE DLSERLMNGN LKLGSREIFD NGNAGIKSEE NHSSCLSQQS SSLKEDPSTP  240
QFGLTAPHAS PNETNAQIGV RNGRPRVDAR GRSLLLPRYW PRFTDQELQQ ISGDSNSVIT  300
PLFEKMLSHS DAGRIGRLVL PKKCAEAYFP PISQPEGLPL KVQDAKGKEW IFQFRFWPNN  360
NSRMYVLEGV TPCIQSMQLQ AGDIVTFSRL EPEGKLVMGF RKASNAPPSD QDHDSNKTMN  420
GVSTHGDAEL ADPSSWSKVD KSGYIAKEVL GAKSSISRKK KNSTLRAKSK RVRIENEDLI  480
QLKITWEEAQ VLLRPPSNHL PSVVVIEGFE FEEYEDAPIL GKPTIFAANN LGEKIQWVQC  540
EDCFKWRKLP ASALLPSKWT CSDNSWDPER SVCSAAQELT AEQLEDLLPH CNLGATRKMK  600
ATKRDPDNVE ALEGLDTLAN LAILGEGETL PASSQATTKH PRHRPGCSCI VCIQPPSGKG  660
PKHKQSCTCN VCQTVKRRFR TLMMRREKKQ SEKEAETIRK KQHQQQPRQL PVPEKLQDDD  720
SLLYNNTGNS SPKQIREINE VSDDEPNKMK SSSSPFKGQI DLNIQPEREE ELSPGSDSGS  780
MMKLLQDATE RYLKQQRLSS SGGNSSANQS HPSGDVAGGE KLTNIINLGS NHSDADEDRP  840
VSLSIKASAS TPAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein