PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900596.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 887aa MW: 98235.7 Da PI: 8.0546

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900596.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.4	1.2e-18	335	434	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l++sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++ XP_023900596.1 335 FEKMLSHSDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRLE-PEGK 427 89************************555566778***********99899999999.*******************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_023900596.1 428 LVMGFRK 434 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 887 aa Download sequence
MSSASSSAKV CYNSECKELK SERARKGWKL RNGEFADLCD RCASVYEEGR FCETFHLSST 60 GWRCCETCGK QVHCGCIVSS HAFTLLDPGG IECMTCARKN VPWSNPAWPT SLCFHPPLQE 120 RLKDLSVKNW NQLAGSGPVP WRQAPSLFNS SIPASEQSRF PYEVDISGGI NKLNANDRLS 180 ASPLEKKKIE DLSERLMNGN LKLGSREIFD NGNAGIKSEE NHSSCLSQQS SSLKEDPSTP 240 QFGLTAPHAS PNETNAQIGV SRTHLRTTPT PLPKLFHGNL HNRVDLSGEA QVRNGRPRVD 300 ARGRSLLLPR YWPRFTDQEL QQISGDSNSV ITPLFEKMLS HSDAGRIGRL VLPKKCAEAY 360 FPPISQPEGL PLKVQDAKGK EWIFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDIVTFS 420 RLEPEGKLVM GFRKASNAPP SDQDHDSNKT MNGVSTHGDA ELADPSSWSK VDKSGYIAKE 480 VLGAKSSISR KKKNSTLRAK SKRVRIENED LIQLKITWEE AQVLLRPPSN HLPSVVVIEG 540 FEFEEYEDAP ILGKPTIFAA NNLGEKIQWV QCEDCFKWRK LPASALLPSK WTCSDNSWDP 600 ERSVCSAAQE LTAEQLEDLL PHCNLGATRK MKATKRDPDN VEALEGLDTL ANLAILGEGE 660 TLPASSQATT KHPRHRPGCS CIVCIQPPSG KGPKHKQSCT CNVCQTVKRR FRTLMMRREK 720 KQSEKEAETI RKKQHQQQPR QLPVPEKLQD DDSLLYNNTG NSSPKQIREI NEVSDDEPNK 780 MKSSSSPFKG QIDLNIQPER EEELSPGSDS GSMMKLLQDA TERYLKQQRL SSSGGNSSAN 840 QSHPSGDVAG GEKLTNIINL GSNHSDADED RPVSLSIKAS ASTPAAG

Sequence ? help Back to Top

Protein Sequence Length: 887 aa Download sequence

MSSASSSAKV CYNSECKELK SERARKGWKL RNGEFADLCD RCASVYEEGR FCETFHLSST  60
GWRCCETCGK QVHCGCIVSS HAFTLLDPGG IECMTCARKN VPWSNPAWPT SLCFHPPLQE  120
RLKDLSVKNW NQLAGSGPVP WRQAPSLFNS SIPASEQSRF PYEVDISGGI NKLNANDRLS  180
ASPLEKKKIE DLSERLMNGN LKLGSREIFD NGNAGIKSEE NHSSCLSQQS SSLKEDPSTP  240
QFGLTAPHAS PNETNAQIGV SRTHLRTTPT PLPKLFHGNL HNRVDLSGEA QVRNGRPRVD  300
ARGRSLLLPR YWPRFTDQEL QQISGDSNSV ITPLFEKMLS HSDAGRIGRL VLPKKCAEAY  360
FPPISQPEGL PLKVQDAKGK EWIFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDIVTFS  420
RLEPEGKLVM GFRKASNAPP SDQDHDSNKT MNGVSTHGDA ELADPSSWSK VDKSGYIAKE  480
VLGAKSSISR KKKNSTLRAK SKRVRIENED LIQLKITWEE AQVLLRPPSN HLPSVVVIEG  540
FEFEEYEDAP ILGKPTIFAA NNLGEKIQWV QCEDCFKWRK LPASALLPSK WTCSDNSWDP  600
ERSVCSAAQE LTAEQLEDLL PHCNLGATRK MKATKRDPDN VEALEGLDTL ANLAILGEGE  660
TLPASSQATT KHPRHRPGCS CIVCIQPPSG KGPKHKQSCT CNVCQTVKRR FRTLMMRREK  720
KQSEKEAETI RKKQHQQQPR QLPVPEKLQD DDSLLYNNTG NSSPKQIREI NEVSDDEPNK  780
MKSSSSPFKG QIDLNIQPER EEELSPGSDS GSMMKLLQDA TERYLKQQRL SSSGGNSSAN  840
QSHPSGDVAG GEKLTNIINL GSNHSDADED RPVSLSIKAS ASTPAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-164	B3 family protein