PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023900547.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 246aa    MW: 28082.9 Da    PI: 5.1233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023900547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.5e-135799754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A++YI++L
  XP_023900547.1 57 VSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIDYIQEL 99
                    57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MENMSEEYKQ YKHYWETNMF LQTEELDSWG LDEAFSGYYD SSSPDGAASS AASKNIVSER  60
NRRKKLNERL FALRAVVPNI SKMDKASIIK DAIDYIQELH DQEKRIQAEI MDLESGKLKK  120
NPGYDFDDQE LPVLLRSKKK KTDQFYDSGG SRISPIEVLE LRATYMGEKT VVVSLTCSKR  180
TDTMVKLCEV FESLKLKIIT ANITAFSGRL VKTVFVEADE EEKDHLKIRI ETAIAALNDP  240
QSPMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.13e-88bHLH family protein